RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 TMEM189-UBE2V1I3L0A0 370 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 MAN2B1O00754 1011 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 TBX3O15119 743 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 SEC24AO95486 1093 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 GJA1P17302 382 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 CCNE1P24864 410 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 VIPR2P41587 438 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 BRCC3P46736 316 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 SOX9P48436 509 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 RARRES1P49788 294 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 CLCNKBP51801 687 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 ELAVL2Q12926 359 aaKnown RBP12.06□□□□□ -0.48
ZNF548-207ENST00000597400 PTGDRQ13258 359 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 BMP2KLQ5H9B9 411 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 EEF1DP3Q658K8 133 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 CDCA2Q69YH5 1023 aaPredicted RBP12.06□□□□□ -0.48
ZNF548-207ENST00000597400 HEATR6Q6AI08 1181 aaKnown RBP12.06□□□□□ -0.48
ZNF548-207ENST00000597400 KRT25Q7Z3Z0 450 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 NEK8Q86SG6 692 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 NOSTRINQ8IVI9 506 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 OXER1Q8TDS5 423 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 BSNDQ8WZ55 320 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 EIF2AK1Q9BQI3 630 aaKnown RBP12.06□□□□□ -0.48
ZNF548-207ENST00000597400 CORO1BQ9BR76 489 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 IER2Q9BTL4 223 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 TRMT61BQ9BVS5 477 aaKnown RBP12.06□□□□□ -0.48
ZNF548-207ENST00000597400 ZFP14Q9HCL3 533 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 BACE2Q9Y5Z0 518 aa12.06□□□□□ -0.48
ZNF548-207ENST00000597400 SMG1Q96Q15 3661 aaKnown RBP12.06□□□□□ -0.48
ZNF548-207ENST00000597400 LRRIQ4A6NIV6 560 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 CCNT1O60563 726 aaKnown RBP12.05□□□□□ -0.48
ZNF548-207ENST00000597400 USO1O60763 962 aaKnown RBP12.05□□□□□ -0.48
ZNF548-207ENST00000597400 DGAT1O75907 488 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 ABLIM3O94929 683 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 DEXIO95424 95 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 PRKCBP05771 671 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 PTPN2P17706 415 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 PSMC3P17980 439 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 CXCL12P48061 93 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 SOX4Q06945 474 aaPredicted RBP12.05□□□□□ -0.48
ZNF548-207ENST00000597400 SSRP1Q08945 709 aaKnown RBP12.05□□□□□ -0.48
ZNF548-207ENST00000597400 UPP1Q16831 310 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 SLC8B1Q6J4K2 584 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 PDXDC1Q6P996 788 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 TXNDC11Q6PKC3 985 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 MAEAQ7L5Y9 396 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 PIGOQ8TEQ8 1089 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 IRF7Q92985 503 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 PPP1R10Q96QC0 940 aaKnown RBP12.05□□□□□ -0.48
ZNF548-207ENST00000597400 HSD17B14Q9BPX1 270 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 LARP6Q9BRS8 491 aaKnown RBP12.05□□□□□ -0.48
ZNF548-207ENST00000597400 FZD8Q9H461 694 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 TRPV5Q9NQA5 729 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 GDAQ9Y2T3 454 aa12.05□□□□□ -0.48
ZNF548-207ENST00000597400 SLC38A8A6NNN8 435 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 C1QTNF9BB2RNN3 333 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 WNT7AO00755 349 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 B3GAT3O94766 335 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 PAPSS2O95340 614 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-207ENST00000597400 LYPLA2O95372 231 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 LRG1P02750 347 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 C1QTNF9P0C862 333 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 GCFC2P16383 781 aaKnown RBP12.04□□□□□ -0.48
ZNF548-207ENST00000597400 HSPA4P34932 840 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 LIMK1P53667 647 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 PPP2R5DQ14738 602 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 FAM187BQ17R55 369 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 PIK3AP1Q6ZUJ8 805 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 RTL10Q7L3V2 364 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 LONP2Q86WA8 852 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 TRIM22Q8IYM9 498 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 SPEM1Q8N4L4 309 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 ZNF461Q8TAF7 563 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 SMARCD2Q92925 531 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 PRIMPOLQ96LW4 560 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 CCDC113Q9H0I3 377 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 SMOC1Q9H4F8 434 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 ANKEF1Q9NU02 776 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 PRMT7Q9NVM4 692 aaPredicted RBP12.04□□□□□ -0.48
ZNF548-207ENST00000597400 CEP72Q9P209 647 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 INSL5Q9Y5Q6 135 aa12.04□□□□□ -0.48
ZNF548-207ENST00000597400 CCDC194A0A1B0GVG4 234 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 PRRG1O14668 218 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 N4BP3O15049 544 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 ATF2P15336 505 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 RBM25P49756 843 aaKnown RBP12.03□□□□□ -0.48
ZNF548-207ENST00000597400 AASDHQ4L235 1098 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-207ENST00000597400 IL31Q6EBC2 164 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 GALNT17Q6IS24 598 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 PKN3Q6P5Z2 889 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 ANKS3Q6ZW76 656 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 PDZD4Q76G19 769 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-207ENST00000597400 TCEAL8Q8IYN2 117 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 CEP120Q8N960 986 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 ZSCAN18Q8TBC5 510 aaPredicted RBP12.03□□□□□ -0.48
ZNF548-207ENST00000597400 YTHDC1Q96MU7 727 aaKnown RBP12.03□□□□□ -0.48
ZNF548-207ENST00000597400 ARRDC1-AS1Q9H2J1 176 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 CYP4F11Q9HBI6 524 aa12.03□□□□□ -0.48
ZNF548-207ENST00000597400 ZNF638Q14966 1978 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms