RNA–Protein interactions for RNA: ENST00000597180.1

IRF3-216, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-216ENST00000597180 PABPC5Q96DU9 382 aaKnown RBP19.66■□□□□ 0.74
IRF3-216ENST00000597180 FAM212AQ96EL1 285 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 KCTD10Q9H3F6 313 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 KIAA1586Q9HCI6 787 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 RMND1Q9NWS8 449 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 THEGQ9P2T0 379 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 PCDHA5Q9Y5H7 936 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 PLXNA3P51805 1871 aa19.66■□□□□ 0.74
IRF3-216ENST00000597180 MTCL1Q9Y4B5 1905 aaKnown RBP19.66■□□□□ 0.74
IRF3-216ENST00000597180 B3GAT3O94766 335 aa19.65■□□□□ 0.74
IRF3-216ENST00000597180 KIF20AO95235 890 aa19.65■□□□□ 0.74
IRF3-216ENST00000597180 URODP06132 367 aa19.65■□□□□ 0.74
IRF3-216ENST00000597180 IGFBP6P24592 240 aaPredicted RBP19.65■□□□□ 0.74
IRF3-216ENST00000597180 GLUD2P49448 558 aa19.65■□□□□ 0.74
IRF3-216ENST00000597180 DSG1Q02413 1049 aa19.65■□□□□ 0.74
IRF3-216ENST00000597180 USP41Q3LFD5 358 aa19.65■□□□□ 0.74
IRF3-216ENST00000597180 KIAA0319Q5VV43 1072 aa19.65■□□□□ 0.74
IRF3-216ENST00000597180 SPATA1Q5VX52 437 aa19.65■□□□□ 0.74
IRF3-216ENST00000597180 RBM23Q86U06 439 aaKnown RBP19.65■□□□□ 0.74
IRF3-216ENST00000597180 GUF1Q8N442 669 aaKnown RBP19.65■□□□□ 0.74
IRF3-216ENST00000597180 HLA-CQ95604 372 aa19.65■□□□□ 0.74
IRF3-216ENST00000597180 SMARCE1Q969G3 411 aa19.65■□□□□ 0.74
IRF3-216ENST00000597180 MRPL17Q9NRX2 175 aaKnown RBP19.65■□□□□ 0.74
IRF3-216ENST00000597180 RBAKQ9NYW8 714 aaPredicted RBP19.65■□□□□ 0.74
IRF3-216ENST00000597180 SSX2IPQ9Y2D8 614 aa19.65■□□□□ 0.74
IRF3-216ENST00000597180 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.64■□□□□ 0.73
IRF3-216ENST00000597180 PDXKO00764 312 aa19.64■□□□□ 0.73
IRF3-216ENST00000597180 PER2O15055 1255 aa19.64■□□□□ 0.73
IRF3-216ENST00000597180 CLIC2O15247 247 aa19.64■□□□□ 0.73
IRF3-216ENST00000597180 WNT7BP56706 349 aa19.64■□□□□ 0.73
IRF3-216ENST00000597180 ADAM15Q13444 863 aa19.64■□□□□ 0.73
IRF3-216ENST00000597180 KCNC3Q14003 757 aa19.64■□□□□ 0.73
IRF3-216ENST00000597180 EFCAB13Q8IY85 973 aa19.64■□□□□ 0.73
IRF3-216ENST00000597180 XXYLT1Q8NBI6 393 aa19.64■□□□□ 0.73
IRF3-216ENST00000597180 BEST2Q8NFU1 509 aa19.64■□□□□ 0.73
IRF3-216ENST00000597180 GBP4Q96PP9 640 aa19.64■□□□□ 0.73
IRF3-216ENST00000597180 IGFLR1Q9H665 355 aa19.64■□□□□ 0.73
IRF3-216ENST00000597180 UBE2ZQ9H832 354 aaPredicted RBP19.64■□□□□ 0.73
IRF3-216ENST00000597180 ZNF233A6NK53 670 aa19.63■□□□□ 0.73
IRF3-216ENST00000597180 CYP2J2P51589 502 aa19.63■□□□□ 0.73
IRF3-216ENST00000597180 COBLL1Q53SF7 1204 aa19.63■□□□□ 0.73
IRF3-216ENST00000597180 ZNF658Q5TYW1 1059 aaPredicted RBP19.63■□□□□ 0.73
IRF3-216ENST00000597180 FAM171A1Q5VUB5 890 aa19.63■□□□□ 0.73
IRF3-216ENST00000597180 CBWD2Q8IUF1 395 aa19.63■□□□□ 0.73
IRF3-216ENST00000597180 SLC9A9Q8IVB4 645 aa19.63■□□□□ 0.73
IRF3-216ENST00000597180 TMEM130Q8N3G9 435 aa19.63■□□□□ 0.73
IRF3-216ENST00000597180 ERCC4Q92889 916 aaPredicted RBP19.63■□□□□ 0.73
IRF3-216ENST00000597180 B3GALT6Q96L58 329 aa19.63■□□□□ 0.73
IRF3-216ENST00000597180 GTPBP4Q9BZE4 634 aaKnown RBP19.63■□□□□ 0.73
IRF3-216ENST00000597180 RXFP1Q9HBX9 757 aa19.63■□□□□ 0.73
IRF3-216ENST00000597180 DMAC2Q9NW81 257 aa19.63■□□□□ 0.73
IRF3-216ENST00000597180 CLDND1Q9NY35 253 aa19.63■□□□□ 0.73
IRF3-216ENST00000597180 LINC01565O15544 149 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 TRAPPC3O43617 180 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 CLASP2O75122 1294 aaKnown RBP19.62■□□□□ 0.73
IRF3-216ENST00000597180 GLP2RO95838 553 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 FGFR3P22607 806 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 CA8P35219 290 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 LTBRP36941 435 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 GUCY2FP51841 1108 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 SURF1Q15526 300 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 SNRNP35Q16560 246 aaKnown RBP19.62■□□□□ 0.73
IRF3-216ENST00000597180 RTP2Q5QGT7 225 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 KIAA1841Q6NSI8 718 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 TMEM184AQ6ZMB5 413 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.62■□□□□ 0.73
IRF3-216ENST00000597180 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.62■□□□□ 0.73
IRF3-216ENST00000597180 VN1R2Q8NFZ6 395 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 NOC3LQ8WTT2 800 aaKnown RBP19.62■□□□□ 0.73
IRF3-216ENST00000597180 ATXN2LQ8WWM7 1075 aaKnown RBP19.62■□□□□ 0.73
IRF3-216ENST00000597180 KLHL5Q96PQ7 755 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 TTPALQ9BTX7 342 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 LMBRD1Q9NUN5 540 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 TRAF3IP3Q9Y228 551 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 TSC2P49815 1807 aa19.62■□□□□ 0.73
IRF3-216ENST00000597180 ANO9A1A5B4 782 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 C2CD2LO14523 706 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 TBX10O75333 385 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 CNPP09543 421 aaKnown RBP19.61■□□□□ 0.73
IRF3-216ENST00000597180 BRCC3P46736 316 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 AARSP49588 968 aaKnown RBP eCLIP19.61■□□□□ 0.732e-7■■■■□ 26.2
IRF3-216ENST00000597180 MYBPC2Q14324 1141 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 NFIL3Q16649 462 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 C9orf57Q5W0N0 161 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 SMYD4Q8IYR2 804 aaPredicted RBP19.61■□□□□ 0.73
IRF3-216ENST00000597180 PIK3R5Q8WYR1 880 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 SUSD3Q96L08 255 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 EMILIN2Q9BXX0 1053 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 PDE11AQ9HCR9 933 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.61■□□□□ 0.73
IRF3-216ENST00000597180 FNIP2Q9P278 1114 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 MAPK8IP1Q9UQF2 711 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 NUB1Q9Y5A7 615 aa19.61■□□□□ 0.73
IRF3-216ENST00000597180 I3L4J1 428 aa19.6■□□□□ 0.73
IRF3-216ENST00000597180 PIRO00625 290 aa19.6■□□□□ 0.73
IRF3-216ENST00000597180 CALUO43852 315 aaPredicted RBP19.6■□□□□ 0.73
IRF3-216ENST00000597180 NR3C1P04150 777 aa19.6■□□□□ 0.73
IRF3-216ENST00000597180 KCNA5P22460 613 aa19.6■□□□□ 0.73
IRF3-216ENST00000597180 CREMQ03060 361 aa19.6■□□□□ 0.73
IRF3-216ENST00000597180 TFF2Q03403 129 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms