RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 KCNT2Q6UVM3 1135 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 AOPEPQ8N6M6 819 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 COLGALT1Q8NBJ5 622 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 BEST2Q8NFU1 509 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 CXorf38Q8TB03 319 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 RABGGTAQ92696 567 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 TIFAQ96CG3 184 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 C17orf80Q9BSJ5 609 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 MTMR12Q9C0I1 747 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 HSD3B7Q9H2F3 369 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 FANCLQ9NW38 375 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 NLRC5Q86WI3 1866 aa24.4■■□□□ 1.5
SNRNP70-204ENST00000595231 XPOTO43592 962 aaKnown RBP24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 LAG3P18627 525 aa24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 IGFBP6P24592 240 aaPredicted RBP24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 LRPAP1P30533 357 aa24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 BMPR1AP36894 532 aa24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 ALDH7A1P49419 539 aaKnown RBP24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 UPP1Q16831 310 aa24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 DUOXA2Q1HG44 320 aa24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 CCDC40Q4G0X9 1142 aa24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 C1orf127Q8N9H9 656 aa24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 CACTINQ8WUQ7 758 aaKnown RBP24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 SLC28A3Q9HAS3 691 aa24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 DPP3Q9NY33 737 aa24.39■■□□□ 1.49
SNRNP70-204ENST00000595231 NT5C1B-RDH14C9J2C7 533 aa24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 F8W810 466 aa24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 TRIM49P0CI25 452 aa24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 TRIM49CP0CI26 452 aa24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 OR1G1P47890 313 aa24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 PPP3CAQ08209 521 aa24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 HSP90AA4PQ58FG1 418 aa24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 PPP2R2DQ66LE6 453 aa24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 TMEM173Q86WV6 379 aaPredicted RBP24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 TRIM59Q8IWR1 403 aa24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 SLC35C1Q96A29 364 aa24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 CNOT6LQ96LI5 555 aaKnown RBP24.38■■□□□ 1.49
SNRNP70-204ENST00000595231 CAVIN2O95810 425 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 TMEM191BP0C7N4 346 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 RPL9P32969 192 aaKnown RBP24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 ERVK-21P61565 698 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 CDKAL1Q5VV42 579 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 USP37Q86T82 979 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 UROC1Q96N76 676 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 ZNF558Q96NG5 402 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 TGS1Q96RS0 853 aaKnown RBP24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 CBX8Q9HC52 389 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 AAASQ9NRG9 546 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 FAN1Q9Y2M0 1017 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 SZT2Q5T011 3432 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 ANO9A1A5B4 782 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 C4BPAP04003 597 aaKnown RBP24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 EPC2Q52LR7 807 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 C9orf57Q5W0N0 161 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 CD300LGQ6UXG3 332 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 C15orf39Q6ZRI6 1047 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 TRAPPC11Q7Z392 1133 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 C3orf58Q8NDZ4 430 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 BCL7CQ8WUZ0 217 aaPredicted RBP24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 DDX27Q96GQ7 796 aaKnown RBP24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 ANKRD36BP1Q96IX9 119 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 TSPY26PQ9H489 355 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 MARCH5Q9NX47 278 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 SIX4Q9UIU6 781 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 PRG3Q9Y2Y8 225 aaPredicted RBP24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 RWDD3Q9Y3V2 267 aa24.37■■□□□ 1.49
SNRNP70-204ENST00000595231 C5orf67F2Z3F1 127 aa24.36■■□□□ 1.49
SNRNP70-204ENST00000595231 PODXLO00592 558 aa24.36■■□□□ 1.49
SNRNP70-204ENST00000595231 PPEF2O14830 753 aa24.36■■□□□ 1.49
SNRNP70-204ENST00000595231 ITGB1P05556 798 aa24.36■■□□□ 1.49
SNRNP70-204ENST00000595231 AP3M2P53677 418 aa24.36■■□□□ 1.49
SNRNP70-204ENST00000595231 SLC39A11Q8N1S5 342 aa24.36■■□□□ 1.49
SNRNP70-204ENST00000595231 MTUS1Q9ULD2 1270 aa24.36■■□□□ 1.49
SNRNP70-204ENST00000595231 PCDHB12Q9Y5F1 795 aa24.36■■□□□ 1.49
SNRNP70-204ENST00000595231 PIRO00625 290 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 TNNC2P02585 160 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 ITGB3P05106 788 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 ZNF18P17022 549 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 CTNNB1P35222 781 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 GCLMP48507 274 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 ZACNQ401N2 412 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 DCAF17Q5H9S7 520 aaPredicted RBP24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 TCERG1LQ5VWI1 586 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 TDRD10Q5VZ19 366 aaKnown RBP24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 DCLRE1AQ6PJP8 1040 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 SV2AQ7L0J3 742 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 SAMD11Q96NU1 681 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 PLVAPQ9BX97 442 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 ITGA11Q9UKX5 1188 aa24.35■■□□□ 1.49
SNRNP70-204ENST00000595231 SMTNL1A8MU46 457 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 KIF4AO95239 1232 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 CST3P01034 146 aaPredicted RBP24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 HABP4Q5JVS0 413 aaKnown RBP24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 LUZP1Q86V48 1076 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 CREBRFQ8IUR6 639 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 FAM114A1Q8IWE2 563 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 KLHL23Q8NBE8 558 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 IGSF21Q96ID5 467 aa24.34■■□□□ 1.49
SNRNP70-204ENST00000595231 LRCH3Q96II8 777 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms