RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 LDHAP00338 332 aaKnown RBP23.81■■□□□ 1.4
HOMER3-206ENST00000594439 CNPP09543 421 aaKnown RBP23.81■■□□□ 1.4
HOMER3-206ENST00000594439 CYP3A5P20815 502 aa23.81■■□□□ 1.4
HOMER3-206ENST00000594439 NDUFV1P49821 464 aa23.81■■□□□ 1.4
HOMER3-206ENST00000594439 ELAVL2Q12926 359 aaKnown RBP23.81■■□□□ 1.4
HOMER3-206ENST00000594439 FAM171A1Q5VUB5 890 aa23.81■■□□□ 1.4
HOMER3-206ENST00000594439 ARMCX5Q6P1M9 558 aa23.81■■□□□ 1.4
HOMER3-206ENST00000594439 NELFCDQ8IXH7 590 aa23.81■■□□□ 1.4
HOMER3-206ENST00000594439 GPR65Q8IYL9 337 aa23.81■■□□□ 1.4
HOMER3-206ENST00000594439 TMEM87AQ8NBN3 555 aa23.81■■□□□ 1.4
HOMER3-206ENST00000594439 MSLNLQ96KJ4 702 aa23.81■■□□□ 1.4
HOMER3-206ENST00000594439 ASB7Q9H672 318 aa23.81■■□□□ 1.4
HOMER3-206ENST00000594439 BARX2Q9UMQ3 279 aaPredicted RBP23.81■■□□□ 1.4
HOMER3-206ENST00000594439 DERAQ9Y315 318 aa23.81■■□□□ 1.4
HOMER3-206ENST00000594439 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.81■■□□□ 1.4
HOMER3-206ENST00000594439 UNC80Q8N2C7 3258 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 TCF20Q9UGU0 1960 aaKnown RBP23.8■■□□□ 1.4
HOMER3-206ENST00000594439 GOLGA8IPA6NC78 632 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 GOLGA8JA6NMD2 632 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 EXTL3O43909 919 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 RHOBTB3O94955 611 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 NFICP08651 508 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 BMP1P13497 986 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 LRPAP1P30533 357 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 BRCC3P46736 316 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 GUCY2FP51841 1108 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 RTP2Q5QGT7 225 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 KIAA1841Q6NSI8 718 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 LLGL2Q6P1M3 1020 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 BRSK2Q8IWQ3 736 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 SLC22A17Q8WUG5 538 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 EMILIN2Q9BXX0 1053 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 AGPAT3Q9NRZ7 376 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 HCFC2Q9Y5Z7 792 aa23.8■■□□□ 1.4
HOMER3-206ENST00000594439 KIAA0391O15091 583 aaKnown RBP23.79■■□□□ 1.4
HOMER3-206ENST00000594439 XPOTO43592 962 aaKnown RBP23.79■■□□□ 1.4
HOMER3-206ENST00000594439 FGFR3P22607 806 aa23.79■■□□□ 1.4
HOMER3-206ENST00000594439 WNT7BP56706 349 aa23.79■■□□□ 1.4
HOMER3-206ENST00000594439 SNRPFP62306 86 aaKnown RBP23.79■■□□□ 1.4
HOMER3-206ENST00000594439 SPATA1Q5VX52 437 aa23.79■■□□□ 1.4
HOMER3-206ENST00000594439 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.79■■□□□ 1.4
HOMER3-206ENST00000594439 GPD1LQ8N335 351 aa23.79■■□□□ 1.4
HOMER3-206ENST00000594439 RIN2Q8WYP3 895 aaPredicted RBP23.79■■□□□ 1.4
HOMER3-206ENST00000594439 CCDC34Q96HJ3 373 aa23.79■■□□□ 1.4
HOMER3-206ENST00000594439 TIGD1Q96MW7 591 aa23.79■■□□□ 1.4
HOMER3-206ENST00000594439 TTPALQ9BTX7 342 aa23.79■■□□□ 1.4
HOMER3-206ENST00000594439 PLXNA3P51805 1871 aa23.79■■□□□ 1.4
HOMER3-206ENST00000594439 I3L4J1 428 aa23.78■■□□□ 1.4
HOMER3-206ENST00000594439 TEX28O15482 410 aa23.78■■□□□ 1.4
HOMER3-206ENST00000594439 IL18RAPO95256 599 aa23.78■■□□□ 1.4
HOMER3-206ENST00000594439 TMEM132DQ14C87 1099 aa23.78■■□□□ 1.4
HOMER3-206ENST00000594439 CLUL1Q15846 466 aa23.78■■□□□ 1.4
HOMER3-206ENST00000594439 KNOP1Q1ED39 458 aaKnown RBP23.78■■□□□ 1.4
HOMER3-206ENST00000594439 EFCAB13Q8IY85 973 aa23.78■■□□□ 1.4
HOMER3-206ENST00000594439 PIK3R5Q8WYR1 880 aa23.78■■□□□ 1.4
HOMER3-206ENST00000594439 CCDC47Q96A33 483 aaKnown RBP23.78■■□□□ 1.4
HOMER3-206ENST00000594439 HSPBP1Q9NZL4 362 aa23.78■■□□□ 1.4
HOMER3-206ENST00000594439 CD207Q9UJ71 328 aa23.78■■□□□ 1.4
HOMER3-206ENST00000594439 C2CD2Q9Y426 696 aa23.78■■□□□ 1.4
HOMER3-206ENST00000594439 TRAPPC3O43617 180 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 SRGAP2BP0DMP2 458 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 EPCAMP16422 314 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 KLRC2P26717 231 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 PNOCQ13519 176 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 KCNB1Q14721 858 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 PTCRAQ6ISU1 281 aaPredicted RBP23.77■■□□□ 1.4
HOMER3-206ENST00000594439 ANKRD54Q6NXT1 300 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 PRSS55Q6UWB4 352 aaPredicted RBP23.77■■□□□ 1.4
HOMER3-206ENST00000594439 PPFIBP1Q86W92 1011 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 CEP57Q86XR8 500 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 BEST2Q8NFU1 509 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 LNX1Q8TBB1 728 aaPredicted RBP23.77■■□□□ 1.4
HOMER3-206ENST00000594439 CASP10Q92851 521 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 TSHZ2Q9NRE2 1034 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.77■■□□□ 1.4
HOMER3-206ENST00000594439 RBAKQ9NYW8 714 aaPredicted RBP23.77■■□□□ 1.4
HOMER3-206ENST00000594439 FNIP2Q9P278 1114 aa23.77■■□□□ 1.4
HOMER3-206ENST00000594439 CLIC2O15247 247 aa23.76■■□□□ 1.39
HOMER3-206ENST00000594439 CLCN4P51793 760 aa23.76■■□□□ 1.39
HOMER3-206ENST00000594439 PUS10Q3MIT2 529 aaKnown RBP23.76■■□□□ 1.39
HOMER3-206ENST00000594439 HS2ST1Q7LGA3 356 aa23.76■■□□□ 1.39
HOMER3-206ENST00000594439 C12orf56Q8IXR9 622 aa23.76■■□□□ 1.39
HOMER3-206ENST00000594439 NOC3LQ8WTT2 800 aaKnown RBP23.76■■□□□ 1.39
HOMER3-206ENST00000594439 FBXL18Q96ME1 805 aa23.76■■□□□ 1.39
HOMER3-206ENST00000594439 CGNQ9P2M7 1197 aaKnown RBP23.76■■□□□ 1.39
HOMER3-206ENST00000594439 NUB1Q9Y5A7 615 aa23.76■■□□□ 1.39
HOMER3-206ENST00000594439 XIRP2A4UGR9 3374 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 GRXCR2A6NFK2 248 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 PPEF2O14830 753 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 MBTPS2O43462 519 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 ADH1AP07327 375 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 RPL17P18621 184 aaKnown RBP23.75■■□□□ 1.39
HOMER3-206ENST00000594439 TKTP29401 623 aaKnown RBP23.75■■□□□ 1.39
HOMER3-206ENST00000594439 CREMQ03060 361 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 SMAD4Q13485 552 aaKnown RBP23.75■■□□□ 1.39
HOMER3-206ENST00000594439 PSMD5Q16401 504 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 SYCE2Q6PIF2 218 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 NT5DC4Q86YG4 428 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 CBWD2Q8IUF1 395 aa23.75■■□□□ 1.39
HOMER3-206ENST00000594439 SMRP1Q8NCR6 262 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms