RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 NUP205Q92621 2012 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 ZNF213O14771 459 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 ANP32CO43423 234 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 PSAPP07602 524 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 MYL4P12829 197 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 AMPD2Q01433 879 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 LY6DQ14210 128 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 CEP55Q53EZ4 464 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 SPDYCQ5MJ68 293 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 UBXN11Q5T124 520 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 SPRYD3Q8NCJ5 442 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 OR2I1PQ8NGU4 316 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 RPLP0P6Q8NHW5 317 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 ZNF512Q96ME7 567 aaPredicted RBP13.2□□□□□ -0.3
ZNF558-202ENST00000593891 GABBR1Q9UBS5 961 aa13.2□□□□□ -0.3
ZNF558-202ENST00000593891 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
ZNF558-202ENST00000593891 HEMK1Q9Y5R4 338 aaPredicted RBP13.2□□□□□ -0.3
ZNF558-202ENST00000593891 ABCA7Q8IZY2 2146 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 ATXN2Q99700 1313 aaKnown RBP13.19□□□□□ -0.3
ZNF558-202ENST00000593891 C2CD3Q4AC94 2353 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 TRDMT1O14717 391 aaKnown RBP13.19□□□□□ -0.3
ZNF558-202ENST00000593891 EGFP01133 1207 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 GJA1P17302 382 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 DRD1P21728 446 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 UBE2SQ16763 222 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 PREPLQ4J6C6 727 aaPredicted RBP13.19□□□□□ -0.3
ZNF558-202ENST00000593891 C2orf27AQ580R0 203 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 PEAR1Q5VY43 1037 aaPredicted RBP13.19□□□□□ -0.3
ZNF558-202ENST00000593891 RHPN2Q8IUC4 686 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 CMTR1Q8N1G2 835 aaKnown RBP13.19□□□□□ -0.3
ZNF558-202ENST00000593891 DAGLBQ8NCG7 672 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 SMG8Q8ND04 991 aaKnown RBP13.19□□□□□ -0.3
ZNF558-202ENST00000593891 HASPINQ8TF76 798 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 EXOC4Q96A65 974 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 NXPE2Q96DL1 559 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 RRP36Q96EU6 259 aaKnown RBP13.19□□□□□ -0.3
ZNF558-202ENST00000593891 SPACA7Q96KW9 195 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 CAPN10Q9HC96 672 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 IPPQ9Y573 584 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 DOPEY2Q9Y3R5 2298 aa13.19□□□□□ -0.3
ZNF558-202ENST00000593891 FAM149AA5PLN7 773 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 MOSPD3O75425 235 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 MAFO75444 373 aaPredicted RBP13.18□□□□□ -0.3
ZNF558-202ENST00000593891 OATP04181 439 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 ITPKAP23677 461 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 TNK2Q07912 1038 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 DRP2Q13474 957 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 TEAD2Q15562 447 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 ANO7Q6IWH7 933 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 SMAP1Q8IYB5 467 aaPredicted RBP13.18□□□□□ -0.3
ZNF558-202ENST00000593891 HACE1Q8IYU2 909 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 MED8Q96G25 268 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 CNOT6LQ96LI5 555 aaKnown RBP13.18□□□□□ -0.3
ZNF558-202ENST00000593891 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 TRIM4Q9C037 500 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 RNF39Q9H2S5 420 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 ASAH2Q9NR71 780 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 THG1LQ9NWX6 298 aaKnown RBP13.18□□□□□ -0.3
ZNF558-202ENST00000593891 SUCLA2Q9P2R7 463 aaPredicted RBP13.18□□□□□ -0.3
ZNF558-202ENST00000593891 MTRRQ9UBK8 725 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 SEC63Q9UGP8 760 aaKnown RBP13.18□□□□□ -0.3
ZNF558-202ENST00000593891 GIT1Q9Y2X7 761 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 PCDHA10Q9Y5I2 948 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 EML5Q05BV3 1969 aa13.18□□□□□ -0.3
ZNF558-202ENST00000593891 MEIS1O00470 390 aa13.17□□□□□ -0.3
ZNF558-202ENST00000593891 TLX3O43711 291 aaPredicted RBP13.17□□□□□ -0.3
ZNF558-202ENST00000593891 HOXA11P31270 313 aaPredicted RBP13.17□□□□□ -0.3
ZNF558-202ENST00000593891 SEMG2Q02383 582 aa13.17□□□□□ -0.3
ZNF558-202ENST00000593891 GRIK3Q13003 919 aa13.17□□□□□ -0.3
ZNF558-202ENST00000593891 NBR1Q14596 966 aa13.17□□□□□ -0.3
ZNF558-202ENST00000593891 PKDCCQ504Y2 493 aa13.17□□□□□ -0.3
ZNF558-202ENST00000593891 RASSF3Q86WH2 238 aa13.17□□□□□ -0.3
ZNF558-202ENST00000593891 ARID3BQ8IVW6 561 aaPredicted RBP13.17□□□□□ -0.3
ZNF558-202ENST00000593891 HS6ST3Q8IZP7 471 aa13.17□□□□□ -0.3
ZNF558-202ENST00000593891 ZNF461Q8TAF7 563 aa13.17□□□□□ -0.3
ZNF558-202ENST00000593891 SETD7Q8WTS6 366 aaKnown RBP13.17□□□□□ -0.3
ZNF558-202ENST00000593891 FAM117AQ9C073 453 aa13.17□□□□□ -0.3
ZNF558-202ENST00000593891 PCOLCE2Q9UKZ9 415 aa13.17□□□□□ -0.3
ZNF558-202ENST00000593891 TPCN1Q9ULQ1 816 aa13.17□□□□□ -0.3
ZNF558-202ENST00000593891 IPO5O00410 1097 aaKnown RBP13.16□□□□□ -0.3
ZNF558-202ENST00000593891 DHX15O43143 795 aaKnown RBP13.16□□□□□ -0.3
ZNF558-202ENST00000593891 CBFA2T3O75081 653 aa13.16□□□□□ -0.3
ZNF558-202ENST00000593891 BYSLQ13895 437 aaKnown RBP13.16□□□□□ -0.3
ZNF558-202ENST00000593891 UBAP2LQ14157 1087 aaKnown RBP13.16□□□□□ -0.3
ZNF558-202ENST00000593891 MCMDC2Q4G0Z9 681 aa13.16□□□□□ -0.3
ZNF558-202ENST00000593891 GPIHBP1Q8IV16 184 aa13.16□□□□□ -0.3
ZNF558-202ENST00000593891 TCEAL8Q8IYN2 117 aa13.16□□□□□ -0.3
ZNF558-202ENST00000593891 CCDC26Q8TAB7 109 aa13.16□□□□□ -0.3
ZNF558-202ENST00000593891 CYP4F11Q9HBI6 524 aa13.16□□□□□ -0.3
ZNF558-202ENST00000593891 OBP2AQ9NY56 170 aa13.16□□□□□ -0.3
ZNF558-202ENST00000593891 SAMM50Q9Y512 469 aa13.16□□□□□ -0.3
ZNF558-202ENST00000593891 BACE2Q9Y5Z0 518 aa13.16□□□□□ -0.3
ZNF558-202ENST00000593891 ITPR3Q14573 2671 aa13.16□□□□□ -0.3
ZNF558-202ENST00000593891 TTC41PQ6P2S7 1318 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 PLK4O00444 970 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 GJB3O75712 270 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 TLE3Q04726 772 aa13.15□□□□□ -0.3
ZNF558-202ENST00000593891 PSMD2Q13200 908 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms