RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 LZTS1Q9Y250 596 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 C2CD2Q9Y426 696 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 MYO7AQ13402 2215 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 PTPRJQ12913 1337 aa10.78□□□□□ -0.68
TPM4-216ENST00000592822 PRRC2BQ5JSZ5 2229 aaKnown RBP10.77□□□□□ -0.68
TPM4-216ENST00000592822 TULP1O00294 542 aaPredicted RBP10.77□□□□□ -0.69
TPM4-216ENST00000592822 PODXLO00592 558 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 XPOTO43592 962 aaKnown RBP10.77□□□□□ -0.69
TPM4-216ENST00000592822 AKAP3O75969 853 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 PTMSP20962 102 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 LRPAP1P30533 357 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 RPL9P32969 192 aaKnown RBP10.77□□□□□ -0.69
TPM4-216ENST00000592822 STX17P56962 302 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 ERVFC1P60507 584 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 PAK1Q13153 545 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 ADAM9Q13443 819 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 SURF1Q15526 300 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 KLHL40Q2TBA0 621 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 DPCR1Q3MIW9 517 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 SCARA3Q6AZY7 606 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 TTI2Q6NXR4 508 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 CAVIN1Q6NZI2 390 aaKnown RBP10.77□□□□□ -0.69
TPM4-216ENST00000592822 TAS1R1Q7RTX1 841 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 NT5DC4Q86YG4 428 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 RNF168Q8IYW5 571 aaPredicted RBP10.77□□□□□ -0.69
TPM4-216ENST00000592822 BEST2Q8NFU1 509 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 OR5B17Q8NGF7 314 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 HASPINQ8TF76 798 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 CCDC127Q96BQ5 260 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 MRPL38Q96DV4 380 aaKnown RBP10.77□□□□□ -0.69
TPM4-216ENST00000592822 DDX27Q96GQ7 796 aaKnown RBP10.77□□□□□ -0.69
TPM4-216ENST00000592822 MED15Q96RN5 788 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 POP1Q99575 1024 aaKnown RBP10.77□□□□□ -0.69
TPM4-216ENST00000592822 TSG101Q99816 390 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 GPR62Q9BZJ7 368 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 LMAN2LQ9H0V9 348 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 DPP3Q9NY33 737 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 LMCD1Q9NZU5 365 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.77□□□□□ -0.69
TPM4-216ENST00000592822 MTCH2Q9Y6C9 303 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 SCN1AP35498 2009 aa10.77□□□□□ -0.69
TPM4-216ENST00000592822 EYSQ5T1H1 3165 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 ANO9A1A5B4 782 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 TMEM189-UBE2V1I3L0A0 370 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 I3L4J1 428 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 PIRO00625 290 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 PPEF2O14830 753 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 FSCN2O14926 492 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 CETN3O15182 167 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 MAPK13O15264 365 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 TADA2AO75478 443 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 B3GAT3O94766 335 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 CSPG5O95196 566 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 DLATP10515 647 aaKnown RBP10.76□□□□□ -0.69
TPM4-216ENST00000592822 IGFBP4P22692 258 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 IRS1P35568 1242 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 PSMC2P35998 433 aaKnown RBP10.76□□□□□ -0.69
TPM4-216ENST00000592822 DLG4P78352 724 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 CLDN10P78369 228 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 TFAMQ00059 246 aaKnown RBP10.76□□□□□ -0.69
TPM4-216ENST00000592822 PTPROQ16827 1216 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 C9orf57Q5W0N0 161 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 LMBRD2Q68DH5 695 aaPredicted RBP10.76□□□□□ -0.69
TPM4-216ENST00000592822 FOXR2Q6PJQ5 311 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 WDR49Q8IV35 697 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 VPS52Q8N1B4 723 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 CXorf38Q8TB03 319 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 PARD3BQ8TEW8 1205 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 ZNF516Q92618 1163 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 BORCS6Q96GS4 357 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 GAS2L1Q99501 681 aaPredicted RBP10.76□□□□□ -0.69
TPM4-216ENST00000592822 CGRRF1Q99675 332 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 TLR9Q9NR96 1032 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 INTS13Q9NVM9 706 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 PUF60Q9UHX1 559 aaKnown RBP10.76□□□□□ -0.69
TPM4-216ENST00000592822 ADAM28Q9UKQ2 775 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 FRMD4BQ9Y2L6 1034 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 PCDHGC5Q9Y5F6 944 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 VWA8A3KMH1 1905 aa10.76□□□□□ -0.69
TPM4-216ENST00000592822 BICDL2A1A5D9 508 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 LRRIQ3A6PVS8 624 aaPredicted RBP10.75□□□□□ -0.69
TPM4-216ENST00000592822 FOSL2P15408 326 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 MCCD1P59942 119 aaPredicted RBP10.75□□□□□ -0.69
TPM4-216ENST00000592822 FKBP3Q00688 224 aaKnown RBP10.75□□□□□ -0.69
TPM4-216ENST00000592822 DUOXA2Q1HG44 320 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 C1orf220Q5T0J3 134 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 FUT10Q6P4F1 479 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 FAM186BQ8IYM0 893 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 C1orf127Q8N9H9 656 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 TMC2Q8TDI7 906 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 CACTINQ8WUQ7 758 aaKnown RBP10.75□□□□□ -0.69
TPM4-216ENST00000592822 AUTS2Q8WXX7 1259 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 B3GALT6Q96L58 329 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 FNBP1Q96RU3 617 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 TCF25Q9BQ70 676 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 MKNK1Q9BUB5 465 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 HERC2P3Q9BVR0 1158 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 MTMR12Q9C0I1 747 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 ZBP1Q9H171 429 aa10.75□□□□□ -0.69
TPM4-216ENST00000592822 SIX4Q9UIU6 781 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms