RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 RIOX1Q9H6W3 641 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 FAM86C1Q9NVL1 165 aa8.65□□□□□ -1.02
VMP1-213ENST00000591877 DOCK5Q9H7D0 1870 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 MROH7Q68CQ1 1323 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 SLC27A2O14975 620 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 ZBTB5O15062 677 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 SHOXO15266 292 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 DHX16O60231 1041 aaKnown RBP8.64□□□□□ -1.03
VMP1-213ENST00000591877 B4GALT4O60513 344 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 S100BP04271 92 aaPredicted RBP8.64□□□□□ -1.03
VMP1-213ENST00000591877 TXNP10599 105 aaKnown RBP8.64□□□□□ -1.03
VMP1-213ENST00000591877 CSF2RAP15509 400 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 PMLP29590 882 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 HSD17B4P51659 736 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 PURAQ00577 322 aaKnown RBP8.64□□□□□ -1.03
VMP1-213ENST00000591877 AUHQ13825 339 aaKnown RBP8.64□□□□□ -1.03
VMP1-213ENST00000591877 CBX2Q14781 532 aaPredicted RBP8.64□□□□□ -1.03
VMP1-213ENST00000591877 WTAPQ15007 396 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 NECTIN1Q15223 517 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 FAM109BQ6ICB4 259 aaPredicted RBP8.64□□□□□ -1.03
VMP1-213ENST00000591877 RALYLQ86SE5 291 aaKnown RBP8.64□□□□□ -1.03
VMP1-213ENST00000591877 ZAR1Q86SH2 424 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 OR6J1Q8NGC5 347 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 SCFD2Q8WU76 684 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 RNF141Q8WVD5 230 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 PIGSQ96S52 555 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 RMDN3Q96TC7 470 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 AMNQ9BXJ7 453 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 TRPV6Q9H1D0 765 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 LY9Q9HBG7 655 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 LRRC4CQ9HCJ2 640 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 ZC3H7BQ9UGR2 993 aaKnown RBP8.64□□□□□ -1.03
VMP1-213ENST00000591877 EMC9Q9Y3B6 208 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 MRPL11Q9Y3B7 192 aaKnown RBP8.64□□□□□ -1.03
VMP1-213ENST00000591877 ZNF451Q9Y4E5 1061 aa8.64□□□□□ -1.03
VMP1-213ENST00000591877 TRIP12Q14669 1992 aaPredicted RBP8.63□□□□□ -1.03
VMP1-213ENST00000591877 NKRFO15226 690 aaKnown RBP eCLIP8.63□□□□□ -1.03
VMP1-213ENST00000591877 ZEB2O60315 1214 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 CFBP00751 764 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 MYL3P08590 195 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 CYP2C18P33260 490 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 PPP2R5BQ15173 497 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 LY6KQ17RY6 165 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 BMP2KLQ5H9B9 411 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 TMEM240Q5SV17 173 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 LETMD1Q6P1Q0 360 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 CENPQQ7L2Z9 268 aaPredicted RBP8.63□□□□□ -1.03
VMP1-213ENST00000591877 ADAT2Q7Z6V5 191 aaKnown RBP8.63□□□□□ -1.03
VMP1-213ENST00000591877 TRIM59Q8IWR1 403 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 ARHGEF39Q8N4T4 335 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 NSUN6Q8TEA1 469 aaKnown RBP8.63□□□□□ -1.03
VMP1-213ENST00000591877 COX4I2Q96KJ9 171 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 CCDC140Q96MF4 163 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 GUCD1Q96NT3 240 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 MYL10Q9BUA6 226 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 YIPF2Q9BWQ6 316 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 ALDH8A1Q9H2A2 487 aaPredicted RBP8.63□□□□□ -1.03
VMP1-213ENST00000591877 GP6Q9HCN6 339 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 PXMP2Q9NR77 195 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 MCM8Q9UJA3 840 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 PCDHA1Q9Y5I3 950 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 FHOD1Q9Y613 1164 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 CHD9Q3L8U1 2897 aa8.63□□□□□ -1.03
VMP1-213ENST00000591877 TANC1Q9C0D5 1861 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 ERICH2A1L162 156 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 B4DLN1 442 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 ALG1L2C9J202 215 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 SH2B2O14492 632 aaPredicted RBP8.62□□□□□ -1.03
VMP1-213ENST00000591877 PRC1O43663 620 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 EFCAB14O75071 495 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 POU3F3P20264 500 aaPredicted RBP8.62□□□□□ -1.03
VMP1-213ENST00000591877 HOXA13P31271 388 aaPredicted RBP8.62□□□□□ -1.03
VMP1-213ENST00000591877 CPT1AP50416 773 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 MRPL12P52815 198 aaKnown RBP8.62□□□□□ -1.03
VMP1-213ENST00000591877 SMAD3P84022 425 aaKnown RBP8.62□□□□□ -1.03
VMP1-213ENST00000591877 ARHGAP1Q07960 439 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 GRB10Q13322 594 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 STXBP2Q15833 593 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 C21orf62-AS1Q17RA5 79 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 ARHGEF16Q5VV41 709 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 YOD1Q5VVQ6 348 aaPredicted RBP8.62□□□□□ -1.03
VMP1-213ENST00000591877 CREB3L3Q68CJ9 461 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 SEPT14Q6ZU15 432 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 PPM1KQ8N3J5 372 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 IL31RAQ8NI17 732 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 PPP1R14AQ96A00 147 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 IWS1Q96ST2 819 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 CEP89Q96ST8 783 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 MPHOSPH6Q99547 160 aaKnown RBP8.62□□□□□ -1.03
VMP1-213ENST00000591877 PDCD2LQ9BRP1 358 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 MTG1Q9BT17 334 aaPredicted RBP8.62□□□□□ -1.03
VMP1-213ENST00000591877 WNT8AQ9H1J5 351 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 TTYH1Q9H313 450 aaPredicted RBP8.62□□□□□ -1.03
VMP1-213ENST00000591877 TRMT13Q9NUP7 481 aaKnown RBP8.62□□□□□ -1.03
VMP1-213ENST00000591877 MAP3K20Q9NYL2 800 aaKnown RBP8.62□□□□□ -1.03
VMP1-213ENST00000591877 SFMBT1Q9UHJ3 866 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 PCDHB12Q9Y5F1 795 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 TET1Q8NFU7 2136 aa8.62□□□□□ -1.03
VMP1-213ENST00000591877 PRODHO43272 600 aa8.61□□□□□ -1.03
VMP1-213ENST00000591877 EIF3JO75822 258 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms