RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 SLC25A3Q00325 362 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 MLC1Q15049 377 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 PABPC1LQ4VXU2 614 aaKnown RBP4.43□□□□□ -1.7
VMP1-212ENST00000591782 FAM102AQ5T9C2 384 aaPredicted RBP4.43□□□□□ -1.7
VMP1-212ENST00000591782 HEATR3Q7Z4Q2 680 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 CAMKK1Q8N5S9 505 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 IL17RDQ8NFM7 739 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 SLC35G2Q8TBE7 412 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 CPT1CQ8TCG5 803 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 CACTINQ8WUQ7 758 aaKnown RBP4.43□□□□□ -1.7
VMP1-212ENST00000591782 C1GALT1C1Q96EU7 318 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 ZNF503Q96F45 646 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 CGRRF1Q99675 332 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 ACO2Q99798 780 aaKnown RBP4.43□□□□□ -1.7
VMP1-212ENST00000591782 TEX101Q9BY14 249 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 GSTO2Q9H4Y5 243 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 ZNF768Q9H5H4 540 aaKnown RBP4.43□□□□□ -1.7
VMP1-212ENST00000591782 KMT5AQ9NQR1 393 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 MAN1C1Q9NR34 630 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 PARPBPQ9NWS1 579 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 TRPM5Q9NZQ8 1165 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 POLHQ9Y253 713 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 CHST2Q9Y4C5 530 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 USP15Q9Y4E8 981 aaPredicted RBP4.43□□□□□ -1.7
VMP1-212ENST00000591782 NR2E3Q9Y5X4 410 aa4.43□□□□□ -1.7
VMP1-212ENST00000591782 F2RL2O00254 374 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 RECQL4O94761 1208 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 HAUS5O94927 633 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 U2AF1L5P0DN76 240 aaPredicted RBP4.42□□□□□ -1.7
VMP1-212ENST00000591782 MTHFD1P11586 935 aaKnown RBP4.42□□□□□ -1.7
VMP1-212ENST00000591782 HK3P52790 923 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 FAM189BP81408 668 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 U2AF1Q01081 240 aaKnown RBP eCLIP4.42□□□□□ -1.71e-15■■■□□ 17.4
VMP1-212ENST00000591782 FOXE3Q13461 319 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 MINDY4Q4G0A6 757 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 FLYWCH1Q4VC44 716 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 PDCD4Q53EL6 469 aaKnown RBP4.42□□□□□ -1.7
VMP1-212ENST00000591782 CCDC157Q569K6 752 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 AGAP9Q5VTM2 703 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 GDF7Q7Z4P5 450 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 C14orf80Q86SX3 495 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 WDR75Q8IWA0 830 aaKnown RBP4.42□□□□□ -1.7
VMP1-212ENST00000591782 ZFPM1Q8IX07 1006 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 SH2D3CQ8N5H7 860 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 FITM2Q8N6M3 262 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 NLGN4YQ8NFZ3 816 aaPredicted RBP4.42□□□□□ -1.7
VMP1-212ENST00000591782 PPP1R35Q8TAP8 253 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 FAM193BQ96PV7 902 aaPredicted RBP4.42□□□□□ -1.7
VMP1-212ENST00000591782 DCLRE1CQ96SD1 692 aaKnown RBP4.42□□□□□ -1.7
VMP1-212ENST00000591782 LMBRD1Q9NUN5 540 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 ABCF2Q9UG63 623 aa4.42□□□□□ -1.7
VMP1-212ENST00000591782 DIRC3C9JPN6 131 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 MATN3O15232 486 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 RPS6KA4O75676 772 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 ARIH2O95376 493 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 PTMSP20962 102 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 NR4A1P22736 598 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 SMARCA1P28370 1054 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 PRDX5P30044 214 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 NOMO3P69849 1222 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 PUM1Q14671 1186 aaKnown RBP eCLIP4.41□□□□□ -1.7
VMP1-212ENST00000591782 ZXDCQ2QGD7 858 aaPredicted RBP4.41□□□□□ -1.7
VMP1-212ENST00000591782 NOMO2Q5JPE7 1267 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 MIIPQ5JXC2 388 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 UTP14CQ5TAP6 766 aaKnown RBP4.41□□□□□ -1.7
VMP1-212ENST00000591782 TSHZ3Q63HK5 1081 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 DENND1CQ8IV53 801 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 RHOT2Q8IXI1 618 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 ZNF276Q8N554 614 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 ZBTB34Q8NCN2 500 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 OR56A1Q8NGH5 318 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 TBC1D15Q8TC07 691 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 RUNDC1Q96C34 613 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 ZNF747Q9BV97 191 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 C1orf43Q9BWL3 253 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 PACSIN1Q9BY11 444 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 CHPF2Q9P2E5 772 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 FEZ2Q9UHY8 353 aaPredicted RBP4.41□□□□□ -1.7
VMP1-212ENST00000591782 SLC45A2Q9UMX9 530 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 MYRFQ9Y2G1 1151 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 ATP11BQ9Y2G3 1177 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 STXBP5LQ9Y2K9 1186 aa4.41□□□□□ -1.7
VMP1-212ENST00000591782 AATKQ6ZMQ8 1374 aa4.4□□□□□ -1.7
VMP1-212ENST00000591782 CCDC78A2IDD5 438 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 H3BML4 177 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 SLC43A1O75387 559 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 NCR1O76036 304 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 UBXN7O94888 489 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 AGFG2O95081 481 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 FTH1P19P0C7X4 201 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 CKBP12277 381 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 TYRP14679 529 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 GCSHP23434 173 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 ZFP36P26651 326 aaKnown RBP4.4□□□□□ -1.71
VMP1-212ENST00000591782 PHKA1P46020 1223 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 NKX6-1P78426 367 aaPredicted RBP4.4□□□□□ -1.71
VMP1-212ENST00000591782 SLFN5Q08AF3 891 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 TUBA3CQ13748 450 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 PLS1Q14651 629 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 CCDC93Q567U6 631 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms