RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 TCEAL4Q96EI5 215 aa15.27■□□□□ 0.04
SF3A2-205ENST00000590034 C8orf76Q96K31 380 aa15.27■□□□□ 0.04
SF3A2-205ENST00000590034 ACO2Q99798 780 aaKnown RBP15.27■□□□□ 0.04
SF3A2-205ENST00000590034 FOXP1Q9H334 677 aaPredicted RBP15.27■□□□□ 0.04
SF3A2-205ENST00000590034 AVENQ9NQS1 362 aaPredicted RBP15.27■□□□□ 0.04
SF3A2-205ENST00000590034 HEBP1Q9NRV9 189 aa15.27■□□□□ 0.04
SF3A2-205ENST00000590034 DDX19AQ9NUU7 478 aaKnown RBP15.27■□□□□ 0.04
SF3A2-205ENST00000590034 GDE1Q9NZC3 331 aa15.27■□□□□ 0.04
SF3A2-205ENST00000590034 FBXO4Q9UKT5 387 aa15.27■□□□□ 0.04
SF3A2-205ENST00000590034 MYH11P35749 1972 aa15.27■□□□□ 0.03
SF3A2-205ENST00000590034 K7ERI5 159 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 PODXLO00592 558 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 LAMTOR5O43504 91 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 TRAPPC3O43617 180 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 KINO60870 393 aaKnown RBP15.26■□□□□ 0.03
SF3A2-205ENST00000590034 SEC24AO95486 1093 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 CCR2P41597 374 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 PEX3P56589 373 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 CSTF1Q05048 431 aaKnown RBP15.26■□□□□ 0.03
SF3A2-205ENST00000590034 MAPK7Q13164 816 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 DGLUCYQ7Z3D6 616 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 TMEM130Q8N3G9 435 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 FBXO18Q8NFZ0 1043 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 NELL1Q92832 810 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 C18orf25Q96B23 403 aaPredicted RBP15.26■□□□□ 0.03
SF3A2-205ENST00000590034 TARS2Q9BW92 718 aaKnown RBP15.26■□□□□ 0.03
SF3A2-205ENST00000590034 ARHGAP28Q9P2N2 729 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 LRWD1Q9UFC0 647 aa15.26■□□□□ 0.03
SF3A2-205ENST00000590034 CCDC169A6NNP5 214 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 PP2D1A8MPX8 630 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 E9PMD0 336 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 HIP1RO75146 1068 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 SEC24BO95487 1268 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 ATF2P15336 505 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 PROZP22891 400 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 TOB1P50616 345 aaPredicted RBP15.25■□□□□ 0.03
SF3A2-205ENST00000590034 YARSP54577 528 aaKnown RBP15.25■□□□□ 0.03
SF3A2-205ENST00000590034 ARPP19P56211 112 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 MRPL58Q14197 206 aaKnown RBP15.25■□□□□ 0.03
SF3A2-205ENST00000590034 GRM2Q14416 872 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 ZBTB41Q5SVQ8 909 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 TSSK4Q6SA08 328 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 TCEAL8Q8IYN2 117 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 ZNF687Q8N1G0 1237 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 IGSF22Q8N9C0 903 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 ZBTB44Q8NCP5 570 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 CORO1BQ9BR76 489 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 RUSC1Q9BVN2 902 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 CCDC94Q9BW85 323 aaPredicted RBP15.25■□□□□ 0.03
SF3A2-205ENST00000590034 TOPORSQ9NS56 1045 aaPredicted RBP15.25■□□□□ 0.03
SF3A2-205ENST00000590034 DLL3Q9NYJ7 618 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 FBXL5Q9UKA1 691 aa15.25■□□□□ 0.03
SF3A2-205ENST00000590034 NCANO14594 1321 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 PRRG1O14668 218 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 SYN3O14994 580 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 SPTLC1O15269 473 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 LRG1P02750 347 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 KCNE1P15382 129 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 PTPN2P17706 415 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 MAGEA9P43362 315 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 PUM1Q14671 1186 aaKnown RBP eCLIP15.24■□□□□ 0.035e-7■□□□□ 8.4
SF3A2-205ENST00000590034 IL17AQ16552 155 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 FAM78AQ5JUQ0 283 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 KCNK18Q7Z418 384 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 APBB1IPQ7Z5R6 666 aaPredicted RBP15.24■□□□□ 0.03
SF3A2-205ENST00000590034 SNX29Q8TEQ0 813 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 ELSPBP1Q96BH3 223 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 ZBTB45Q96K62 511 aaPredicted RBP15.24■□□□□ 0.03
SF3A2-205ENST00000590034 ZSWIM3Q96MP5 696 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 MRPL4Q9BYD3 311 aaKnown RBP15.24■□□□□ 0.03
SF3A2-205ENST00000590034 TMEM134Q9H6X4 195 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 CYP4F11Q9HBI6 524 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 PRMT8Q9NR22 394 aaPredicted RBP15.24■□□□□ 0.03
SF3A2-205ENST00000590034 SLC38A7Q9NVC3 462 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 CNTN3Q9P232 1028 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 PCDHGA2Q9Y5H1 932 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 INSL5Q9Y5Q6 135 aa15.24■□□□□ 0.03
SF3A2-205ENST00000590034 TPRP12270 2363 aaKnown RBP15.24■□□□□ 0.03
SF3A2-205ENST00000590034 LILRB5O75023 590 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 MOSPD3O75425 235 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 MCF2P10911 925 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 CDC25AP30304 524 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 ELF1P32519 619 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 RPS9P46781 194 aaKnown RBP15.23■□□□□ 0.03
SF3A2-205ENST00000590034 TRAPPC10P48553 1259 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 MTAPQ13126 283 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 DMP1Q13316 513 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-205ENST00000590034 RINT1Q6NUQ1 792 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 ZNF852Q6ZMS4 543 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 HS6ST3Q8IZP7 471 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 DNASE1L2Q92874 299 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 SUSD3Q96L08 255 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 ASB16Q96NS5 453 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 LLPHQ9BRT6 129 aaKnown RBP15.23■□□□□ 0.03
SF3A2-205ENST00000590034 MMTAG2Q9BU76 263 aaKnown RBP15.23■□□□□ 0.03
SF3A2-205ENST00000590034 KMT5AQ9NQR1 393 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 ZSCAN32Q9NX65 697 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 DAXXQ9UER7 740 aaPredicted RBP15.23■□□□□ 0.03
SF3A2-205ENST00000590034 LIMCH1Q9UPQ0 1083 aa15.23■□□□□ 0.03
SF3A2-205ENST00000590034 PCDHB6Q9Y5E3 794 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms