RNA–Protein interactions for RNA: ENST00000589851.1

PTPRS-207, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 5

Gene PTPRS, Length 1,270 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-207ENST00000589851 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 SRGAP2BP0DMP2 458 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 LRPAP1P30533 357 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 SNRPFP62306 86 aaKnown RBP17.2■□□□□ 0.34
PTPRS-207ENST00000589851 SPAG1Q07617 926 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 FAM171A1Q5VUB5 890 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 PPFIBP1Q86W92 1011 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 C3orf58Q8NDZ4 430 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 CCDC47Q96A33 483 aaKnown RBP17.2■□□□□ 0.34
PTPRS-207ENST00000589851 FAM212AQ96EL1 285 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 SAAL1Q96ER3 474 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 KLHL5Q96PQ7 755 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 FAM213AQ9BRX8 229 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 TTPALQ9BTX7 342 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 RXFP1Q9HBX9 757 aa17.2■□□□□ 0.34
PTPRS-207ENST00000589851 C2CD2LO14523 706 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 EXTL3O43909 919 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 RHOBTB3O94955 611 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 CNPP09543 421 aaKnown RBP17.19■□□□□ 0.34
PTPRS-207ENST00000589851 IGFBP6P24592 240 aaPredicted RBP17.19■□□□□ 0.34
PTPRS-207ENST00000589851 RBM10P98175 930 aaKnown RBP17.19■□□□□ 0.34
PTPRS-207ENST00000589851 STK4Q13043 487 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 KNOP1Q1ED39 458 aaKnown RBP17.19■□□□□ 0.34
PTPRS-207ENST00000589851 SPATA1Q5VX52 437 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 JADE1Q6IE81 842 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.19■□□□□ 0.34
PTPRS-207ENST00000589851 NELFCDQ8IXH7 590 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 GPD1LQ8N335 351 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 ZSWIM2Q8NEG5 633 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 SLC22A17Q8WUG5 538 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 RIN2Q8WYP3 895 aaPredicted RBP17.19■□□□□ 0.34
PTPRS-207ENST00000589851 CASP10Q92851 521 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 B3GALT6Q96L58 329 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 PCIF1Q9H4Z3 704 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.19■□□□□ 0.34
PTPRS-207ENST00000589851 FNIP2Q9P278 1114 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 CGNQ9P2M7 1197 aaKnown RBP17.19■□□□□ 0.34
PTPRS-207ENST00000589851 TUBGCP4Q9UGJ1 667 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 CD207Q9UJ71 328 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 BARX2Q9UMQ3 279 aaPredicted RBP17.19■□□□□ 0.34
PTPRS-207ENST00000589851 C2CD2Q9Y426 696 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 HCFC2Q9Y5Z7 792 aa17.19■□□□□ 0.34
PTPRS-207ENST00000589851 ADH1AP07327 375 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 FGFR3P22607 806 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 KLRC2P26717 231 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 BRCC3P46736 316 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 CREMQ03060 361 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 KCNB1Q14721 858 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 TMEM132DQ14C87 1099 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 RTP2Q5QGT7 225 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 PTCRAQ6ISU1 281 aaPredicted RBP17.18■□□□□ 0.34
PTPRS-207ENST00000589851 LLGL2Q6P1M3 1020 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 PDXDC1Q6P996 788 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 NT5DC4Q86YG4 428 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 BRSK2Q8IWQ3 736 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 KIAA0895Q8NCT3 520 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 BEST2Q8NFU1 509 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 PIK3R5Q8WYR1 880 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 TIGD1Q96MW7 591 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 KIAA1586Q9HCI6 787 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 AGPAT3Q9NRZ7 376 aa17.18■□□□□ 0.34
PTPRS-207ENST00000589851 MTCL1Q9Y4B5 1905 aaKnown RBP17.17■□□□□ 0.34
PTPRS-207ENST00000589851 GOLGA8IPA6NC78 632 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 GRXCR2A6NFK2 248 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 GOLGA8JA6NMD2 632 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 TEX28O15482 410 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 C1RP00736 705 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 NFICP08651 508 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 HOXB8P17481 243 aaPredicted RBP17.17■□□□□ 0.34
PTPRS-207ENST00000589851 CLCN4P51793 760 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 ANKRD54Q6NXT1 300 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 HS2ST1Q7LGA3 356 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 CEP57Q86XR8 500 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 C12orf56Q8IXR9 622 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 SMRP1Q8NCR6 262 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 LNX1Q8TBB1 728 aaPredicted RBP17.17■□□□□ 0.34
PTPRS-207ENST00000589851 FBXL18Q96ME1 805 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 RBAKQ9NYW8 714 aaPredicted RBP17.17■□□□□ 0.34
PTPRS-207ENST00000589851 HSPBP1Q9NZL4 362 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 FAM50BQ9Y247 325 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 NUB1Q9Y5A7 615 aa17.17■□□□□ 0.34
PTPRS-207ENST00000589851 MBTPS2O43462 519 aa17.16■□□□□ 0.34
PTPRS-207ENST00000589851 GUCY2FP51841 1108 aa17.16■□□□□ 0.34
PTPRS-207ENST00000589851 SMAD4Q13485 552 aaKnown RBP17.16■□□□□ 0.34
PTPRS-207ENST00000589851 CLUL1Q15846 466 aa17.16■□□□□ 0.34
PTPRS-207ENST00000589851 PSMD5Q16401 504 aa17.16■□□□□ 0.34
PTPRS-207ENST00000589851 PRSS55Q6UWB4 352 aaPredicted RBP17.16■□□□□ 0.34
PTPRS-207ENST00000589851 ELOA2Q8IYF1 753 aaPredicted RBP17.16■□□□□ 0.34
PTPRS-207ENST00000589851 GOLGA5Q8TBA6 731 aa17.16■□□□□ 0.34
PTPRS-207ENST00000589851 SUSD3Q96L08 255 aa17.16■□□□□ 0.34
PTPRS-207ENST00000589851 DZANK1Q9NVP4 752 aa17.16■□□□□ 0.34
PTPRS-207ENST00000589851 PLXNA3P51805 1871 aa17.16■□□□□ 0.34
PTPRS-207ENST00000589851 SCN1AP35498 2009 aa17.15■□□□□ 0.34
PTPRS-207ENST00000589851 ANO9A1A5B4 782 aa17.15■□□□□ 0.34
PTPRS-207ENST00000589851 ZNF233A6NK53 670 aa17.15■□□□□ 0.34
PTPRS-207ENST00000589851 I3L4J1 428 aa17.15■□□□□ 0.34
PTPRS-207ENST00000589851 SYN3O14994 580 aa17.15■□□□□ 0.34
PTPRS-207ENST00000589851 CLIC2O15247 247 aa17.15■□□□□ 0.34
PTPRS-207ENST00000589851 GADD45BO75293 160 aaPredicted RBP17.15■□□□□ 0.34
PTPRS-207ENST00000589851 KIF20AO95235 890 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms