RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.33□□□□□ -0.6
SDF2-208ENST00000589788 FSD2A1L4K1 749 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 POLR2DO15514 142 aaKnown RBP11.33□□□□□ -0.6
SDF2-208ENST00000589788 PROZP22891 400 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 GTF2F1P35269 517 aaKnown RBP eCLIP11.33□□□□□ -0.6
SDF2-208ENST00000589788 SKOR1P84550 965 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 TUSC3Q13454 348 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 RESP18Q5W5W9 173 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 TMEM173Q86WV6 379 aaPredicted RBP11.33□□□□□ -0.6
SDF2-208ENST00000589788 CEP120Q8N960 986 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 GSTCDQ8NEC7 633 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 BCL7CQ8WUZ0 217 aaPredicted RBP11.33□□□□□ -0.6
SDF2-208ENST00000589788 LEO1Q8WVC0 666 aaPredicted RBP11.33□□□□□ -0.6
SDF2-208ENST00000589788 STAMQ92783 540 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 ZBTB45Q96K62 511 aaPredicted RBP11.33□□□□□ -0.6
SDF2-208ENST00000589788 ACAP3Q96P50 834 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 CDCA3Q99618 268 aaPredicted RBP11.33□□□□□ -0.6
SDF2-208ENST00000589788 PYM1Q9BRP8 204 aaKnown RBP11.33□□□□□ -0.6
SDF2-208ENST00000589788 SCAND2PQ9GZW5 306 aaPredicted RBP11.33□□□□□ -0.6
SDF2-208ENST00000589788 TNMDQ9H2S6 317 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 VRTNQ9H8Y1 702 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 MRPL44Q9H9J2 332 aaKnown RBP11.33□□□□□ -0.6
SDF2-208ENST00000589788 PANK4Q9NVE7 773 aa11.33□□□□□ -0.6
SDF2-208ENST00000589788 CITO14578 2027 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 TRIP11Q15643 1979 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.32□□□□□ -0.6
SDF2-208ENST00000589788 PTGESO14684 152 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 PER2O15055 1255 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 CXCL14O95715 111 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 SRGAP2BP0DMP2 458 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 NDUFV1P49821 464 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 KCNQ1P51787 676 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 GTF2BQ00403 316 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 COL19A1Q14993 1142 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 AGERQ15109 404 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 LEXMQ3ZCV2 418 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 ZC2HC1CQ53FD0 456 aaPredicted RBP11.32□□□□□ -0.6
SDF2-208ENST00000589788 HERC4Q5GLZ8 1057 aaPredicted RBP11.32□□□□□ -0.6
SDF2-208ENST00000589788 CCDC65Q8IXS2 484 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 EFHBQ8N7U6 833 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 MRPL43Q8N983 215 aaKnown RBP11.32□□□□□ -0.6
SDF2-208ENST00000589788 KCNN1Q92952 543 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 HVCN1Q96D96 273 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 DNAJC19Q96DA6 116 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 ST6GALNAC4Q9H4F1 302 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 MAGEF1Q9HAY2 307 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 KBTBD4Q9NVX7 518 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 TBC1D7Q9P0N9 293 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 KCNH3Q9ULD8 1083 aa11.32□□□□□ -0.6
SDF2-208ENST00000589788 CASTOR2A6NHX0 329 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 HIDE1A8MVS5 230 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 H3BQ06 376 aaPredicted RBP11.31□□□□□ -0.6
SDF2-208ENST00000589788 ABLIM1O14639 778 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 LINC01565O15544 149 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 GCNT3O95395 438 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 PIGRP01833 764 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 CTSAP10619 480 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 ASIC1P78348 528 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 MCL1Q07820 350 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 ADAM15Q13444 863 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 ELOAQ14241 798 aaKnown RBP11.31□□□□□ -0.6
SDF2-208ENST00000589788 HSP90AA2PQ14568 343 aaPredicted RBP11.31□□□□□ -0.6
SDF2-208ENST00000589788 KYAT1Q16773 422 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 DUSP6Q16828 381 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 CTC1Q2NKJ3 1217 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 CRTC2Q53ET0 693 aaPredicted RBP11.31□□□□□ -0.6
SDF2-208ENST00000589788 GLRA4Q5JXX5 417 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 ADALQ6DHV7 355 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 KIAA1841Q6NSI8 718 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 CLEC17AQ6ZS10 378 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 ZNF720Q7Z2F6 126 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 MAP4K3Q8IVH8 894 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 CEP57L1Q8IYX8 460 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 RABGGTAQ92696 567 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 CHAMP1Q96JM3 812 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 FIZ1Q96SL8 496 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 MSTO1Q9BUK6 570 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 ZBP1Q9H171 429 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 MRPL17Q9NRX2 175 aaKnown RBP11.31□□□□□ -0.6
SDF2-208ENST00000589788 SLC38A7Q9NVC3 462 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 MARCH5Q9NX47 278 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 ADAM28Q9UKQ2 775 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 EXOC7Q9UPT5 735 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 FAM50BQ9Y247 325 aa11.31□□□□□ -0.6
SDF2-208ENST00000589788 TCF20Q9UGU0 1960 aaKnown RBP11.3□□□□□ -0.6
SDF2-208ENST00000589788 SMIM28A0A1B0GU29 152 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 FRMD3A2A2Y4 597 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 C2orf71A6NGG8 1288 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 ESPNB1AK53 854 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 OGTO15294 1046 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 TADA2AO75478 443 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 SOD2P04179 222 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 URODP06132 367 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 CMA1P23946 247 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 LTBRP36941 435 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 GLUD2P49448 558 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 COASYQ13057 564 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 ALCAMQ13740 583 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 CLUL1Q15846 466 aa11.3□□□□□ -0.6
SDF2-208ENST00000589788 SEZ6Q53EL9 994 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms