RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 WDR64B1ANS9 1081 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 PYCARD-AS1I3L0S3 204 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 TSPAN1O60635 241 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 MAFO75444 373 aaPredicted RBP6.79□□□□□ -1.32
VPS25-204ENST00000589577 NR1I2O75469 434 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 DDAH1O94760 285 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 GSPT1P15170 499 aaKnown RBP6.79□□□□□ -1.32
VPS25-204ENST00000589577 ENGP17813 658 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 RXRAP19793 462 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 FGFR3P22607 806 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 AKAP5P24588 427 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 TNK2Q07912 1038 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 GRIK3Q13003 919 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 NAB2Q15742 525 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 ZNF423Q2M1K9 1284 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 PCSK4Q6UW60 755 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 CWC27Q6UX04 472 aaKnown RBP6.79□□□□□ -1.32
VPS25-204ENST00000589577 RTL10Q7L3V2 364 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 CYP2U1Q7Z449 544 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 HS6ST3Q8IZP7 471 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 CAMKK1Q8N5S9 505 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 DAGLBQ8NCG7 672 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 CNNM3Q8NE01 707 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 CTCFLQ8NI51 663 aaPredicted RBP6.79□□□□□ -1.32
VPS25-204ENST00000589577 ADAMTS14Q8WXS8 1223 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 CXCL16Q9H2A7 254 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 FSCN3Q9NQT6 498 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 DISC1Q9NRI5 854 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 KLK14Q9P0G3 267 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 DKK4Q9UBT3 224 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 SEPT9Q9UHD8 586 aaPredicted RBP6.79□□□□□ -1.32
VPS25-204ENST00000589577 MBD1Q9UIS9 605 aaPredicted RBP6.79□□□□□ -1.32
VPS25-204ENST00000589577 SLC8A2Q9UPR5 921 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 SAMM50Q9Y512 469 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 COL4A3BPQ9Y5P4 624 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 FLNCQ14315 2725 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 DENND4CQ5VZ89 1909 aa6.79□□□□□ -1.32
VPS25-204ENST00000589577 PTGESO14684 152 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 EDIL3O43854 480 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 RNF40O75150 1001 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 SEC24AO95486 1093 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 FOSP01100 380 aaPredicted RBP6.78□□□□□ -1.32
VPS25-204ENST00000589577 CYP3A4P08684 503 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 CYP21A2P08686 494 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 CD59P13987 128 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 GBP1P32455 592 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 ZNF76P36508 570 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 DNM2P50570 870 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 EPHA5P54756 1037 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 ROR1Q01973 937 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 SPIRE1Q08AE8 756 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 AP3B2Q13367 1082 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 TUSC3Q13454 348 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 KARSQ15046 597 aaKnown RBP6.78□□□□□ -1.32
VPS25-204ENST00000589577 TEAD2Q15562 447 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 TRIM61Q5EBN2 209 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 TMEM196Q5HYL7 178 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 STXBP5Q5T5C0 1151 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 CD300LGQ6UXG3 332 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.78□□□□□ -1.32
VPS25-204ENST00000589577 PDZD4Q76G19 769 aaPredicted RBP6.78□□□□□ -1.32
VPS25-204ENST00000589577 SRGAP1Q7Z6B7 1085 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 SKAP1Q86WV1 359 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 GPIHBP1Q8IV16 184 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 CCDC82Q8N4S0 544 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 PNPLA1Q8N8W4 532 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 SHKBP1Q8TBC3 707 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 GJA10Q969M2 543 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 DDX27Q96GQ7 796 aaKnown RBP6.78□□□□□ -1.32
VPS25-204ENST00000589577 CPB2Q96IY4 423 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 CAMK1GQ96NX5 476 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 LZTS2Q9BRK4 669 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 FBRSL1Q9HCM7 1045 aaKnown RBP6.78□□□□□ -1.32
VPS25-204ENST00000589577 TMEM74BQ9NUR3 256 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 CEP72Q9P209 647 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 EBF1Q9UH73 591 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 GIT1Q9Y2X7 761 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 INSL5Q9Y5Q6 135 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 OBSL1O75147 1896 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 GOLGA4Q13439 2230 aaKnown RBP6.78□□□□□ -1.32
VPS25-204ENST00000589577 ZMYM2Q9UBW7 1377 aa6.78□□□□□ -1.32
VPS25-204ENST00000589577 CNTNAP5Q8WYK1 1306 aa6.77□□□□□ -1.32
VPS25-204ENST00000589577 DOPEY2Q9Y3R5 2298 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 ERICH2A1L162 156 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 OTOL1A6NHN0 477 aaPredicted RBP6.77□□□□□ -1.33
VPS25-204ENST00000589577 ZNF197O14709 1029 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 CHMP2AO43633 222 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 ABLIM3O94929 683 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 EGFP01133 1207 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 LRG1P02750 347 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 FTH1P19P0C7X4 201 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 SRGAP2CP0DJJ0 459 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 CHMLP26374 656 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 TKTP29401 623 aaKnown RBP6.77□□□□□ -1.33
VPS25-204ENST00000589577 ADCY7P51828 1080 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 NAPAP54920 295 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 SETQ01105 290 aaPredicted RBP6.77□□□□□ -1.33
VPS25-204ENST00000589577 LMAN2Q12907 356 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 AMHR2Q16671 573 aa6.77□□□□□ -1.33
VPS25-204ENST00000589577 PRR16Q569H4 304 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms