RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 XPO4Q9C0E2 1151 aaKnown RBP23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 PLEKHA5Q9HAU0 1116 aa23.04■■□□□ 1.28
R3HDM4-204ENST00000589428 RFXAPO00287 272 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 B4GALT3O60512 393 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 ADCY5O95622 1261 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 ZNF75DP51815 510 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 COPB1P53618 953 aaKnown RBP23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 TUSC3Q13454 348 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 ENOX2Q16206 610 aaKnown RBP23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 XKR4Q5GH76 650 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 ALKAL1Q6UXT8 129 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 FRMD5Q7Z6J6 570 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 CBWD2Q8IUF1 395 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 TRIM59Q8IWR1 403 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 COLGALT2Q8IYK4 626 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 GPD1LQ8N335 351 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 GUCD1Q96NT3 240 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 CDX2Q99626 313 aaPredicted RBP23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 FAM213AQ9BRX8 229 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 CXCL16Q9H2A7 254 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 SLC38A7Q9NVC3 462 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 INTS13Q9NVM9 706 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 SPG21Q9NZD8 308 aa23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 ARMCX3Q9UH62 379 aaPredicted RBP23.03■■□□□ 1.28
R3HDM4-204ENST00000589428 MYO9BQ13459 2157 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 A0A1B0GTH6 734 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 SMIM28A0A1B0GU29 152 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 EXTL3O43909 919 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 FGF18O76093 207 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 ADRB2P07550 413 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 GALTP07902 379 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 KCNE1P15382 129 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 OR1G1P47890 313 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 SLC11A1P49279 550 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 UBASH3AP57075 661 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 SNRNP35Q16560 246 aaKnown RBP23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 RDH13Q8NBN7 331 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 FAM212AQ96EL1 285 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 TMEM169Q96HH4 297 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 PPP1R10Q96QC0 940 aaKnown RBP23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 TTC26A0AVF1 554 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 NT5C1B-RDH14C9J2C7 533 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 ALDH2P05091 517 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 POU5F1Q01860 360 aaKnown RBP23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 HSP90AA2PQ14568 343 aaPredicted RBP23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 MIIPQ5JXC2 388 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 CD302Q8IX05 232 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 SLC39A11Q8N1S5 342 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 MYLIPQ8WY64 445 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 VPS16Q9H269 839 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 FAN1Q9Y2M0 1017 aa23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 PRG3Q9Y2Y8 225 aaPredicted RBP23.02■■□□□ 1.28
R3HDM4-204ENST00000589428 MAPK13O15264 365 aa23.01■■□□□ 1.27
R3HDM4-204ENST00000589428 MEFVO15553 781 aaPredicted RBP23.01■■□□□ 1.27
R3HDM4-204ENST00000589428 ITGB1P05556 798 aa23.01■■□□□ 1.27
R3HDM4-204ENST00000589428 PRKCSHP14314 528 aaPredicted RBP23.01■■□□□ 1.27
R3HDM4-204ENST00000589428 METTL14Q9HCE5 456 aaKnown RBP23.01■■□□□ 1.27
R3HDM4-204ENST00000589428 ALG13Q9NP73 1137 aaKnown RBP23.01■■□□□ 1.27
R3HDM4-204ENST00000589428 CASTOR2A6NHX0 329 aa23■■□□□ 1.27
R3HDM4-204ENST00000589428 LACTBL1A8MY62 500 aa23■■□□□ 1.27
R3HDM4-204ENST00000589428 NRP1O14786 923 aa23■■□□□ 1.27
R3HDM4-204ENST00000589428 KRT17Q04695 432 aa23■■□□□ 1.27
R3HDM4-204ENST00000589428 MAN2A1Q16706 1144 aa23■■□□□ 1.27
R3HDM4-204ENST00000589428 PTPROQ16827 1216 aa23■■□□□ 1.27
R3HDM4-204ENST00000589428 CRELD2Q6UXH1 353 aaPredicted RBP23■■□□□ 1.27
R3HDM4-204ENST00000589428 ZMAT2Q96NC0 199 aaKnown RBP23■■□□□ 1.27
R3HDM4-204ENST00000589428 LMAN2LQ9H0V9 348 aa23■■□□□ 1.27
R3HDM4-204ENST00000589428 KIAA1586Q9HCI6 787 aa23■■□□□ 1.27
R3HDM4-204ENST00000589428 RTN4Q9NQC3 1192 aaKnown RBP23■■□□□ 1.27
R3HDM4-204ENST00000589428 RBAKQ9NYW8 714 aaPredicted RBP23■■□□□ 1.27
R3HDM4-204ENST00000589428 LGALS16A8MUM7 142 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 LPXNO60711 386 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 FOSL2P15408 326 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 IGFBP4P22692 258 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 PLCB3Q01970 1234 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 UBE3AQ05086 875 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 TRIP11Q15643 1979 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 NAB2Q15742 525 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 BRSK2Q8IWQ3 736 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 KIF12Q96FN5 646 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 MRFAP1L1Q96HT8 127 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 IGSF21Q96ID5 467 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 TSPAN18Q96SJ8 248 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 ASB7Q9H672 318 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 TULP1O00294 542 aaPredicted RBP22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 GRM6O15303 877 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 CBFA2T2O43439 604 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 XPOTO43592 962 aaKnown RBP22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 IL18RAPO95256 599 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 INTS8Q75QN2 995 aaKnown RBP22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 TMEM173Q86WV6 379 aaPredicted RBP22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 SLC35C1Q96A29 364 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 UROC1Q96N76 676 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 COLEC11Q9BWP8 271 aa22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 PUF60Q9UHX1 559 aaKnown RBP22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.99■■□□□ 1.27
R3HDM4-204ENST00000589428 TEX33O43247 280 aa22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 CYP24A1Q07973 514 aa22.98■■□□□ 1.27
R3HDM4-204ENST00000589428 BFSP1Q12934 665 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms