RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ZNF461Q8TAF7 563 aa20.22■□□□□ 0.83
CCDC43-204ENST00000588687 BCO2Q9BYV7 579 aa20.22■□□□□ 0.83
CCDC43-204ENST00000588687 DDX19AQ9NUU7 478 aaKnown RBP20.22■□□□□ 0.83
CCDC43-204ENST00000588687 KIAA1024Q9UPX6 916 aa20.22■□□□□ 0.83
CCDC43-204ENST00000588687 MED19A0JLT2 244 aaPredicted RBP20.21■□□□□ 0.83
CCDC43-204ENST00000588687 FAM170BA6NMN3 283 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 K7ERI5 159 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 PODXLO00592 558 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 TRAPPC3O43617 180 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 KCNE1P15382 129 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 CCR2P41597 374 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 MAGEA9P43362 315 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 TRAPPC10P48553 1259 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 MRPL58Q14197 206 aaKnown RBP20.21■□□□□ 0.83
CCDC43-204ENST00000588687 TPRG1Q6ZUI0 275 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 CCDC83Q8IWF9 413 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 ZBTB44Q8NCP5 570 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 PRMT8Q9NR22 394 aaPredicted RBP20.21■□□□□ 0.83
CCDC43-204ENST00000588687 TOPORSQ9NS56 1045 aaPredicted RBP20.21■□□□□ 0.83
CCDC43-204ENST00000588687 SPATA6Q9NWH7 488 aaPredicted RBP20.21■□□□□ 0.83
CCDC43-204ENST00000588687 DLL3Q9NYJ7 618 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 CNTN3Q9P232 1028 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 TICRRQ7Z2Z1 1910 aa20.21■□□□□ 0.83
CCDC43-204ENST00000588687 SPTLC1O15269 473 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 KINO60870 393 aaKnown RBP20.2■□□□□ 0.82
CCDC43-204ENST00000588687 SEC24AO95486 1093 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 ATF2P15336 505 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 TOB1P50616 345 aaPredicted RBP20.2■□□□□ 0.82
CCDC43-204ENST00000588687 PEX3P56589 373 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 OSTNP61366 133 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 TANGO2Q6ICL3 276 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 TCEAL8Q8IYN2 117 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 ELSPBP1Q96BH3 223 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 TCEAL4Q96EI5 215 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 MCRS1Q96EZ8 462 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 LLPHQ9BRT6 129 aaKnown RBP20.2■□□□□ 0.82
CCDC43-204ENST00000588687 RUSC1Q9BVN2 902 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 TARS2Q9BW92 718 aaKnown RBP20.2■□□□□ 0.82
CCDC43-204ENST00000588687 TMEM134Q9H6X4 195 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 LRWD1Q9UFC0 647 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 PCDHGA2Q9Y5H1 932 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 NCANO14594 1321 aa20.2■□□□□ 0.82
CCDC43-204ENST00000588687 PP2D1A8MPX8 630 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 E9PMD0 336 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 SYN3O14994 580 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 LAMTOR5O43504 91 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 HIP1RO75146 1068 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 SEC24BO95487 1268 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 RPS9P46781 194 aaKnown RBP20.19■□□□□ 0.82
CCDC43-204ENST00000588687 IL17AQ16552 155 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 KCNK18Q7Z418 384 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 APBB1IPQ7Z5R6 666 aaPredicted RBP20.19■□□□□ 0.82
CCDC43-204ENST00000588687 SNX29Q8TEQ0 813 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 C18orf25Q96B23 403 aaPredicted RBP20.19■□□□□ 0.82
CCDC43-204ENST00000588687 MMTAG2Q9BU76 263 aaKnown RBP20.19■□□□□ 0.82
CCDC43-204ENST00000588687 CCDC94Q9BW85 323 aaPredicted RBP20.19■□□□□ 0.82
CCDC43-204ENST00000588687 MRPL4Q9BYD3 311 aaKnown RBP20.19■□□□□ 0.82
CCDC43-204ENST00000588687 HEBP1Q9NRV9 189 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 SLC38A7Q9NVC3 462 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 FBXL5Q9UKA1 691 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 INSL5Q9Y5Q6 135 aa20.19■□□□□ 0.82
CCDC43-204ENST00000588687 EPG5Q9HCE0 2579 aa20.18■□□□□ 0.82
CCDC43-204ENST00000588687 LILRB5O75023 590 aa20.18■□□□□ 0.82
CCDC43-204ENST00000588687 MOSPD3O75425 235 aa20.18■□□□□ 0.82
CCDC43-204ENST00000588687 MCF2P10911 925 aa20.18■□□□□ 0.82
CCDC43-204ENST00000588687 TDGF1P13385 188 aa20.18■□□□□ 0.82
CCDC43-204ENST00000588687 YARSP54577 528 aaKnown RBP20.18■□□□□ 0.82
CCDC43-204ENST00000588687 DMP1Q13316 513 aaPredicted RBP20.18■□□□□ 0.82
CCDC43-204ENST00000588687 PDIA5Q14554 519 aa20.18■□□□□ 0.82
CCDC43-204ENST00000588687 C1orf186Q6ZWK4 172 aa20.18■□□□□ 0.82
CCDC43-204ENST00000588687 DNASE1L2Q92874 299 aa20.18■□□□□ 0.82
CCDC43-204ENST00000588687 LIMCH1Q9UPQ0 1083 aa20.18■□□□□ 0.82
CCDC43-204ENST00000588687 MYH11P35749 1972 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 CCDC169A6NNP5 214 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 MICAL2O94851 1124 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 LRG1P02750 347 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 PTPN2P17706 415 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 U2AF2P26368 475 aaKnown RBP eCLIP20.17■□□□□ 0.82
CCDC43-204ENST00000588687 CSTF1Q05048 431 aaKnown RBP20.17■□□□□ 0.82
CCDC43-204ENST00000588687 FAM78AQ5JUQ0 283 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 ZBTB41Q5SVQ8 909 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 RINT1Q6NUQ1 792 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 MPZL3Q6UWV2 235 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 TMEM130Q8N3G9 435 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 SUSD3Q96L08 255 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 ASB16Q96NS5 453 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 HINFPQ9BQA5 517 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 CORO1BQ9BR76 489 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 EPC1Q9H2F5 836 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 PCDHB6Q9Y5E3 794 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 TSC2P49815 1807 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 SPTBN2O15020 2390 aa20.17■□□□□ 0.82
CCDC43-204ENST00000588687 PRRG1O14668 218 aa20.16■□□□□ 0.82
CCDC43-204ENST00000588687 EPHA5P54756 1037 aa20.16■□□□□ 0.82
CCDC43-204ENST00000588687 PTGDRQ13258 359 aa20.16■□□□□ 0.82
CCDC43-204ENST00000588687 PUM1Q14671 1186 aaKnown RBP eCLIP20.16■□□□□ 0.82
CCDC43-204ENST00000588687 TPGS2Q68CL5 300 aa20.16■□□□□ 0.82
CCDC43-204ENST00000588687 DGLUCYQ7Z3D6 616 aa20.16■□□□□ 0.82
CCDC43-204ENST00000588687 BORCS6Q96GS4 357 aa20.16■□□□□ 0.82
CCDC43-204ENST00000588687 ZBTB45Q96K62 511 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms