RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SMYD4Q8IYR2 804 aaPredicted RBP21.93■■□□□ 1.1
DDX39A-207ENST00000588542 NOC3LQ8WTT2 800 aaKnown RBP21.93■■□□□ 1.1
DDX39A-207ENST00000588542 CHST7Q9NS84 486 aa21.93■■□□□ 1.1
DDX39A-207ENST00000588542 IRAK3Q9Y616 596 aa21.93■■□□□ 1.1
DDX39A-207ENST00000588542 PLXNA3P51805 1871 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 SF3B1O75533 1304 aaKnown RBP eCLIP21.92■■□□□ 1.11e-6■■■■■ 49.9
DDX39A-207ENST00000588542 PER2O15055 1255 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 B3GAT3O94766 335 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 NRIP1P48552 1158 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 TMEM132DQ14C87 1099 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 SKIV2LQ15477 1246 aaKnown RBP21.92■■□□□ 1.1
DDX39A-207ENST00000588542 ZNF658Q5TYW1 1059 aaPredicted RBP21.92■■□□□ 1.1
DDX39A-207ENST00000588542 KIAA0319Q5VV43 1072 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 XXYLT1Q8NBI6 393 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 GOLGA5Q8TBA6 731 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 TMEM174Q8WUU8 243 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 B3GALT6Q96L58 329 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 KIAA1586Q9HCI6 787 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 DMAC2Q9NW81 257 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 C2CD2Q9Y426 696 aa21.92■■□□□ 1.1
DDX39A-207ENST00000588542 ZNF233A6NK53 670 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 XPOTO43592 962 aaKnown RBP21.91■■□□□ 1.1
DDX39A-207ENST00000588542 KIF20AO95235 890 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 DSG1Q02413 1049 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 DUSP6Q16828 381 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 CTC1Q2NKJ3 1217 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 COBLL1Q53SF7 1204 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 SLC9A9Q8IVB4 645 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 PPP2R3CQ969Q6 453 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 IGFLR1Q9H665 355 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 TLE6Q9H808 572 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 PDE11AQ9HCR9 933 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 MAN1B1Q9UKM7 699 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 TRAF3IP3Q9Y228 551 aa21.91■■□□□ 1.1
DDX39A-207ENST00000588542 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.91■■□□□ 1.1
DDX39A-207ENST00000588542 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.9■■□□□ 1.1
DDX39A-207ENST00000588542 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.9■■□□□ 1.1
DDX39A-207ENST00000588542 LINC01565O15544 149 aa21.9■■□□□ 1.1
DDX39A-207ENST00000588542 PRCPP42785 496 aa21.9■■□□□ 1.1
DDX39A-207ENST00000588542 BRCC3P46736 316 aa21.9■■□□□ 1.1
DDX39A-207ENST00000588542 GLUD2P49448 558 aa21.9■■□□□ 1.1
DDX39A-207ENST00000588542 SNRNP35Q16560 246 aaKnown RBP21.9■■□□□ 1.1
DDX39A-207ENST00000588542 USP41Q3LFD5 358 aa21.9■■□□□ 1.1
DDX39A-207ENST00000588542 NT5DC4Q86YG4 428 aa21.9■■□□□ 1.1
DDX39A-207ENST00000588542 RDH13Q8NBN7 331 aa21.9■■□□□ 1.1
DDX39A-207ENST00000588542 BEST2Q8NFU1 509 aa21.9■■□□□ 1.1
DDX39A-207ENST00000588542 PABPC5Q96DU9 382 aaKnown RBP21.9■■□□□ 1.1
DDX39A-207ENST00000588542 MTCL1Q9Y4B5 1905 aaKnown RBP21.9■■□□□ 1.1
DDX39A-207ENST00000588542 I3L4J1 428 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 C2CD2LO14523 706 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 PPEF2O14830 753 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 URODP06132 367 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 BMP6P22004 513 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 CA8P35219 290 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 ADAM15Q13444 863 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 KCNC3Q14003 757 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 BMS1Q14692 1282 aaKnown RBP21.89■■□□□ 1.09
DDX39A-207ENST00000588542 CAMK4Q16566 473 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 ZCWPW2Q504Y3 356 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 RTP2Q5QGT7 225 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 FAM171A1Q5VUB5 890 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 ISM2Q6H9L7 571 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 EFHBQ8N7U6 833 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 VN1R2Q8NFZ6 395 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 FAM84AQ96KN4 292 aa21.89■■□□□ 1.09
DDX39A-207ENST00000588542 CDCA3Q99618 268 aaPredicted RBP21.89■■□□□ 1.09
DDX39A-207ENST00000588542 MRPL17Q9NRX2 175 aaKnown RBP21.89■■□□□ 1.09
DDX39A-207ENST00000588542 PTPRJQ12913 1337 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 TSC2P49815 1807 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 ANO9A1A5B4 782 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 NCK2O43639 380 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 CLASP2O75122 1294 aaKnown RBP21.88■■□□□ 1.09
DDX39A-207ENST00000588542 GLP2RO95838 553 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 NR3C1P04150 777 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 FGFR3P22607 806 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 LTBRP36941 435 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 CYP24A1Q07973 514 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 ELAVL2Q12926 359 aaKnown RBP21.88■■□□□ 1.09
DDX39A-207ENST00000588542 NFIL3Q16649 462 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 C9orf57Q5W0N0 161 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 GPR65Q8IYL9 337 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 HLA-CQ95604 372 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 MFSD14AQ96MC6 490 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 GZF1Q9H116 711 aaPredicted RBP21.88■■□□□ 1.09
DDX39A-207ENST00000588542 UBE2ZQ9H832 354 aaPredicted RBP21.88■■□□□ 1.09
DDX39A-207ENST00000588542 RXFP1Q9HBX9 757 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 DPP3Q9NY33 737 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 COG5Q9UP83 839 aa21.88■■□□□ 1.09
DDX39A-207ENST00000588542 PIRO00625 290 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 CALUO43852 315 aaPredicted RBP21.87■■□□□ 1.09
DDX39A-207ENST00000588542 EXOC3O60645 756 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 CNPP09543 421 aaKnown RBP21.87■■□□□ 1.09
DDX39A-207ENST00000588542 CASP4P49662 377 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 RBM10P98175 930 aaKnown RBP21.87■■□□□ 1.09
DDX39A-207ENST00000588542 MORC3Q14149 939 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 MYBPC2Q14324 1141 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.87■■□□□ 1.09
DDX39A-207ENST00000588542 ADSSL1Q8N142 457 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 RIN2Q8WYP3 895 aaPredicted RBP21.87■■□□□ 1.09
DDX39A-207ENST00000588542 SUSD3Q96L08 255 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms