RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 HCFC1R1Q9NWW0 138 aa17■□□□□ 0.31
TRAPPC6A-204ENST00000588062 DNMT3BQ9UBC3 853 aaKnown RBP17■□□□□ 0.31
TRAPPC6A-204ENST00000588062 CA14Q9ULX7 337 aa17■□□□□ 0.31
TRAPPC6A-204ENST00000588062 MYH15Q9Y2K3 1946 aa17■□□□□ 0.31
TRAPPC6A-204ENST00000588062 NPHP3-ACAD11A0A0J9YXS1 232 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 TOM1L1O75674 476 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 ABLIM3O94929 683 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 CENPBP07199 599 aaPredicted RBP16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 PLA2G4BP0C869 781 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 RPL9P32969 192 aaKnown RBP16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 MRPL58Q14197 206 aaKnown RBP16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 ASCL5Q7RTU5 278 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 ZNF461Q8TAF7 563 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 LRRC15Q8TF66 581 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 HAPLN2Q9GZV7 340 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 TBC1D17Q9HA65 648 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 KCND2Q9NZV8 630 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 KCNG1Q9UIX4 513 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 POLIQ9UNA4 740 aa16.99■□□□□ 0.31
TRAPPC6A-204ENST00000588062 DMDP11532 3685 aa16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 H3BQV1 296 aa16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 HARSP12081 509 aaKnown RBP16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 SMTNP53814 917 aa16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 GPC5P78333 572 aa16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 ROR1Q01973 937 aa16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 NOLC1Q14978 699 aaKnown RBP eCLIP16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 SEZ6Q53EL9 994 aa16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 VARS2Q5ST30 1063 aaKnown RBP16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 PHLDB3Q6NSJ2 640 aa16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 POTEHQ6S545 545 aa16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 ZPBP2Q6X784 338 aa16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 KCNN1Q92952 543 aa16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 KCNH3Q9ULD8 1083 aa16.98■□□□□ 0.31
TRAPPC6A-204ENST00000588062 ARHGEF37A1IGU5 675 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 WDR27A2RRH5 827 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 PRR23AA6NEV1 266 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 SYN3O14994 580 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 MCL1Q07820 350 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 STRN3Q13033 797 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 ANGPT1Q15389 498 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 PABPC1LQ4VXU2 614 aaKnown RBP16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 FRMD5Q7Z6J6 570 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 NPAS3Q8IXF0 933 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 TMEM130Q8N3G9 435 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 SUSD3Q96L08 255 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 ARHGEF3Q9NR81 526 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 DLGAP2Q9P1A6 1054 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 ANKFY1Q9P2R3 1169 aa16.97■□□□□ 0.31
TRAPPC6A-204ENST00000588062 F5P12259 2224 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 STK25O00506 426 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 CLDN3O15551 220 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 ATF2P15336 505 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 NCKAP1LP55160 1127 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 SLC5A9Q2M3M2 681 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 MTSS1LQ765P7 747 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 AK8Q96MA6 479 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 AVENQ9NQS1 362 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 BLOC1S4Q9NUP1 217 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 LARSQ9P2J5 1176 aaKnown RBP16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 FBXL5Q9UKA1 691 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 SMC3Q9UQE7 1217 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 NUB1Q9Y5A7 615 aa16.96■□□□□ 0.31
TRAPPC6A-204ENST00000588062 TTC26A0AVF1 554 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 SLC26A4O43511 780 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 SEC24AO95486 1093 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 RHOP08100 348 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 CXCL8P10145 99 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 MCM2P49736 904 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 STARD6P59095 220 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 GRIN1Q05586 938 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 ZBTB6Q15916 424 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 LARP1BQ659C4 914 aaKnown RBP16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 HAUS6Q7Z4H7 955 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 TCEAL8Q8IYN2 117 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 ING5Q8WYH8 240 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 TBC1D32Q96NH3 1257 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 REEP2Q9BRK0 252 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 PLEKHA5Q9HAU0 1116 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 TUBGCP4Q9UGJ1 667 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 ODF2LQ9ULJ1 636 aa16.95■□□□□ 0.3
TRAPPC6A-204ENST00000588062 H0YCG3 227 aa16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 H7C4K7 107 aa16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 FAM189A1O60320 539 aa16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 DCNP07585 359 aaKnown RBP16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 CLTAP09496 248 aa16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 PTPN2P17706 415 aa16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 ZNF131P52739 623 aa16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 SPAG1Q07617 926 aa16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 TPGS2Q68CL5 300 aa16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 DDX12PQ92771 950 aa16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 DDX23Q9BUQ8 820 aaKnown RBP16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 MRPS23Q9Y3D9 190 aaKnown RBP16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 SIT1Q9Y3P8 196 aa16.94■□□□□ 0.3
TRAPPC6A-204ENST00000588062 PIGRP01833 764 aa16.93■□□□□ 0.3
TRAPPC6A-204ENST00000588062 GLULP15104 373 aa16.93■□□□□ 0.3
TRAPPC6A-204ENST00000588062 RFX1P22670 979 aa16.93■□□□□ 0.3
TRAPPC6A-204ENST00000588062 LRPAP1P30533 357 aa16.93■□□□□ 0.3
TRAPPC6A-204ENST00000588062 ELF1P32519 619 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms