RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 ARHGEF37A1IGU5 675 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 CLSTN1O94985 981 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 TNNC2P02585 160 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 SOD2P04179 222 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 ADRB2P07550 413 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 SRGAP2BP0DMP2 458 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 DLATP10515 647 aaKnown RBP12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 MCM4P33991 863 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 GLUD2P49448 558 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 CREMQ03060 361 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 MORC3Q14149 939 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 NAB2Q15742 525 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 NFIL3Q16649 462 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 UPP1Q16831 310 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 USP41Q3LFD5 358 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 ISM2Q6H9L7 571 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 KLHL10Q6JEL2 608 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 PDXDC1Q6P996 788 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 DCLRE1AQ6PJP8 1040 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 CRELD2Q6UXH1 353 aaPredicted RBP12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 WDR49Q8IV35 697 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 RDH13Q8NBN7 331 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 DHTKD1Q96HY7 919 aaPredicted RBP12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 FBXL18Q96ME1 805 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 ZNF560Q96MR9 790 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 CXCL16Q9H2A7 254 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 MRPL17Q9NRX2 175 aaKnown RBP12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 CACNG4Q9UBN1 327 aa12.86□□□□□ -0.35
SDHDP1-201ENST00000588055 CETN3O15182 167 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 CTSAP10619 480 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 EPB41P11171 864 aaKnown RBP12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 KRT13P13646 458 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 TNNI1P19237 187 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 PAX3P23760 479 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 LRPAP1P30533 357 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 PNPLA4P41247 253 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 SOX4Q06945 474 aaPredicted RBP12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 CYP24A1Q07973 514 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 PAK1Q13153 545 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 PSMD6Q15008 389 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 CCDC183Q5T5S1 534 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 SPATA1Q5VX52 437 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 ADSSL1Q8N142 457 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 GPT2Q8TD30 523 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 TMEM174Q8WUU8 243 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 BCL7CQ8WUZ0 217 aaPredicted RBP12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 PPM1EQ8WY54 764 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 RABGGTAQ92696 567 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 CCDC127Q96BQ5 260 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 PAAF1Q9BRP4 392 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 EMILIN2Q9BXX0 1053 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 ZBP1Q9H171 429 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 PDE11AQ9HCR9 933 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 DPP3Q9NY33 737 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 ITGA11Q9UKX5 1188 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 CTNND2Q9UQB3 1225 aa12.85□□□□□ -0.35
SDHDP1-201ENST00000588055 MEFVO15553 781 aaPredicted RBP12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 NCK2O43639 380 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 CCNE1P24864 410 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 DNAJB1P25685 340 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 PSMC2P35998 433 aaKnown RBP12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 ADAM9Q13443 819 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 CCDC85BQ15834 202 aaPredicted RBP12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 DUOXA2Q1HG44 320 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 ZCWPW2Q504Y3 356 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 TCEAL5Q5H9L2 206 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 FAM171A1Q5VUB5 890 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 ELMSAN1Q6PJG2 1045 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 INTS8Q75QN2 995 aaKnown RBP12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 CEP57Q86XR8 500 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 EFCAB13Q8IY85 973 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 FAM186BQ8IYM0 893 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 ZSWIM2Q8NEG5 633 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 NELFBQ8WX92 580 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 CDCA3Q99618 268 aaPredicted RBP12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 CGRRF1Q99675 332 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 MTMR12Q9C0I1 747 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 TLE6Q9H808 572 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 ATG2AQ2TAZ0 1938 aa12.84□□□□□ -0.35
SDHDP1-201ENST00000588055 F8W810 466 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 C2CD2LO14523 706 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 FSCN2O14926 492 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 MAPK13O15264 365 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 SLC16A3O15427 465 aaKnown RBP12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 FGFR1OPO95684 399 aaKnown RBP12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 CXCL14O95715 111 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 ADH1AP07327 375 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 KRT19P08727 400 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 ODC1P11926 461 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 IRS1P35568 1242 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 TAF6P49848 677 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 AP3M2P53677 418 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 ERVFC1P60507 584 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 FKBP3Q00688 224 aaKnown RBP12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 PTPN14Q15678 1187 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 ZBTB6Q15916 424 aa12.83□□□□□ -0.36
SDHDP1-201ENST00000588055 SV2CQ496J9 727 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms