RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CASTOR2A6NHX0 329 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 PHACTR2O75167 634 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 ALDH2P05091 517 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 CA3P07451 260 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 MYOGP15173 224 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 GTF2H1P32780 548 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 RPL9P32969 192 aaKnown RBP14.72□□□□□ -0.05
VMP1-203ENST00000586245 ALDH7A1P49419 539 aaKnown RBP14.72□□□□□ -0.05
VMP1-203ENST00000586245 BCAR1P56945 870 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 CLDN10P78369 228 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 SOX4Q06945 474 aaPredicted RBP14.72□□□□□ -0.05
VMP1-203ENST00000586245 BIRC3Q13489 604 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 TCP11X2Q5H9J9 407 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 OR5B17Q8NGF7 314 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 ZNF558Q96NG5 402 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 PBX4Q9BYU1 374 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 MMRN2Q9H8L6 949 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 GOLGA2P5Q9HBQ8 144 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 HCSTQ9UBK5 93 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 DNAJB4Q9UDY4 337 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 ITGA11Q9UKX5 1188 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 FAN1Q9Y2M0 1017 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 RWDD3Q9Y3V2 267 aa14.72□□□□□ -0.05
VMP1-203ENST00000586245 LINC01553A4QN01 128 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 NRP1O14786 923 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 ITGB3P05106 788 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 KRT19P08727 400 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 PRKCSHP14314 528 aaPredicted RBP14.71□□□□□ -0.05
VMP1-203ENST00000586245 LRPAP1P30533 357 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 PBX2P40425 430 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 GCLMP48507 274 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 SLC11A1P49279 550 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 GUCY2FP51841 1108 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 MCCD1P59942 119 aaPredicted RBP14.71□□□□□ -0.05
VMP1-203ENST00000586245 MAN2A1Q16706 1144 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 LRIT3Q3SXY7 679 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 C1orf220Q5T0J3 134 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 KCNT2Q6UVM3 1135 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 TRAPPC11Q7Z392 1133 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 C1orf127Q8N9H9 656 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 COLGALT1Q8NBJ5 622 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 ZNF516Q92618 1163 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 CLP1Q92989 425 aaKnown RBP14.71□□□□□ -0.05
VMP1-203ENST00000586245 SLC35C1Q96A29 364 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 SAMD11Q96NU1 681 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 TUBGCP2Q9BSJ2 902 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 COLEC11Q9BWP8 271 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 NKX2-4Q9H2Z4 354 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 TMEM8AQ9HCN3 771 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 YBX2Q9Y2T7 364 aaKnown RBP14.71□□□□□ -0.05
VMP1-203ENST00000586245 PCDHB12Q9Y5F1 795 aa14.71□□□□□ -0.05
VMP1-203ENST00000586245 TDRD15B5MCY1 1934 aaKnown RBP14.7□□□□□ -0.06
VMP1-203ENST00000586245 ANK1P16157 1881 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 PES1O00541 588 aaKnown RBP14.7□□□□□ -0.06
VMP1-203ENST00000586245 PODXLO00592 558 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 B4GALT3O60512 393 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 N4BP1O75113 896 aaKnown RBP14.7□□□□□ -0.06
VMP1-203ENST00000586245 AFPP02771 609 aaKnown RBP14.7□□□□□ -0.06
VMP1-203ENST00000586245 C4BPAP04003 597 aaKnown RBP14.7□□□□□ -0.06
VMP1-203ENST00000586245 GALTP07902 379 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 ZNF18P17022 549 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 DNAJB2P25686 324 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 CTNNB1P35222 781 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 PPM1AP35813 382 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 MXI1P50539 228 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 CLCNKBP51801 687 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 RBP5P82980 135 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 PPP3CAQ08209 521 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 KCNH2Q12809 1159 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 TRPC3Q13507 836 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 TDRD10Q5VZ19 366 aaKnown RBP14.7□□□□□ -0.06
VMP1-203ENST00000586245 KRT39Q6A163 491 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 DCLRE1AQ6PJP8 1040 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 SV2AQ7L0J3 742 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 RNF214Q8ND24 703 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 FAM84AQ96KN4 292 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 TGS1Q96RS0 853 aaKnown RBP14.7□□□□□ -0.06
VMP1-203ENST00000586245 SLC28A3Q9HAS3 691 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 CACNG4Q9UBN1 327 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 AGAP1Q9UPQ3 857 aa14.7□□□□□ -0.06
VMP1-203ENST00000586245 PRG3Q9Y2Y8 225 aaPredicted RBP14.7□□□□□ -0.06
VMP1-203ENST00000586245 TRIP11Q15643 1979 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 ANO9A1A5B4 782 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 B3GAT3O94766 335 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 CLSTN1O94985 981 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 POLR2BP30876 1174 aaKnown RBP14.69□□□□□ -0.06
VMP1-203ENST00000586245 BMPR1AP36894 532 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 PBX3P40426 434 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 PNPLA4P41247 253 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 PIK3CAP42336 1068 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 CETN1Q12798 172 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 KRT31Q15323 416 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 UPP1Q16831 310 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 ZACNQ401N2 412 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 C9orf57Q5W0N0 161 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 PPP2R2DQ66LE6 453 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 RABGGTAQ92696 567 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 TIFAQ96CG3 184 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 ZNF560Q96MR9 790 aa14.69□□□□□ -0.06
VMP1-203ENST00000586245 PAAF1Q9BRP4 392 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms