RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 ROR1Q01973 937 aa22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 CSTF1Q05048 431 aaKnown RBP22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 DMP1Q13316 513 aaPredicted RBP22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 XKR4Q5GH76 650 aa22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 KRT79Q5XKE5 535 aa22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 RINT1Q6NUQ1 792 aa22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 IGSF22Q8N9C0 903 aa22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 BCO2Q9BYV7 579 aa22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 NUB1Q9Y5A7 615 aa22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 EP300Q09472 2414 aaPredicted RBP22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 COL4A3Q01955 1670 aa22.03■■□□□ 1.12
CLPTM1-204ENST00000585961 WDR27A2RRH5 827 aa22.02■■□□□ 1.12
CLPTM1-204ENST00000585961 MEFVO15553 781 aaPredicted RBP22.02■■□□□ 1.12
CLPTM1-204ENST00000585961 LAMTOR5O43504 91 aa22.02■■□□□ 1.12
CLPTM1-204ENST00000585961 HMGN5P82970 282 aaKnown RBP22.02■■□□□ 1.12
CLPTM1-204ENST00000585961 FOXK2Q01167 660 aa22.02■■□□□ 1.12
CLPTM1-204ENST00000585961 PRKCQQ04759 706 aa22.02■■□□□ 1.12
CLPTM1-204ENST00000585961 C1orf186Q6ZWK4 172 aa22.02■■□□□ 1.12
CLPTM1-204ENST00000585961 ZSCAN31Q96LW9 406 aaPredicted RBP22.02■■□□□ 1.12
CLPTM1-204ENST00000585961 DDX23Q9BUQ8 820 aaKnown RBP22.02■■□□□ 1.12
CLPTM1-204ENST00000585961 SLC38A7Q9NVC3 462 aa22.02■■□□□ 1.12
CLPTM1-204ENST00000585961 VWA8A3KMH1 1905 aa22.02■■□□□ 1.11
CLPTM1-204ENST00000585961 CACNA1IQ9P0X4 2223 aa22.02■■□□□ 1.11
CLPTM1-204ENST00000585961 DCHS1Q96JQ0 3298 aa22.02■■□□□ 1.11
CLPTM1-204ENST00000585961 FRYLO94915 3013 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 NRG2O14511 850 aaPredicted RBP22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 ABLIM3O94929 683 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 POU2F2P09086 479 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 U2AF2P26368 475 aaKnown RBP eCLIP22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 PFKPQ01813 784 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 SPAG1Q07617 926 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 MAPK7Q13164 816 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 ZC3H14Q6PJT7 736 aaKnown RBP22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 DTHD1Q6ZMT9 781 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 TPRG1Q6ZUI0 275 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 RTL10Q7L3V2 364 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 HS6ST3Q8IZP7 471 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 RMDN1Q96DB5 314 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 MMTAG2Q9BU76 263 aaKnown RBP22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 RAB34Q9BZG1 259 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 LTB4R2Q9NPC1 389 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 HEBP1Q9NRV9 189 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 ARHGAP28Q9P2N2 729 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 RBM19Q9Y4C8 960 aaKnown RBP22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 STK24Q9Y6E0 443 aa22.01■■□□□ 1.11
CLPTM1-204ENST00000585961 ARHGEF37A1IGU5 675 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 TBC1D4O60343 1298 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 MCF2P10911 925 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 KCNE1P15382 129 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 GRM2Q14416 872 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 CTXN3Q4LDR2 81 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 ZBTB41Q5SVQ8 909 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 MCTP1Q6DN14 999 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 SLC8B1Q6J4K2 584 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 MPZL3Q6UWV2 235 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 DRC1Q96MC2 740 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 ZSWIM3Q96MP5 696 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 GDE1Q9NZC3 331 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 FBXL5Q9UKA1 691 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 PHLPP2Q6ZVD8 1323 aa22■■□□□ 1.11
CLPTM1-204ENST00000585961 NOTCH4Q99466 2003 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 NPHP3-ACAD11A0A0J9YXS1 232 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 H7C4K7 107 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 ABLIM1O14639 778 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 EIF5BO60841 1220 aaKnown RBP21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 ECI2O75521 394 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 ATF2P15336 505 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 PROZP22891 400 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 TARSP26639 723 aaKnown RBP21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 RPL9P32969 192 aaKnown RBP21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 CCR2P41597 374 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 MATR3P43243 847 aaKnown RBP eCLIP21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 MRPL58Q14197 206 aaKnown RBP21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 SLC10A6Q3KNW5 377 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 FAM78AQ5JUQ0 283 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 TSSK4Q6SA08 328 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 TBC1D32Q96NH3 1257 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 ANKFY1Q9P2R3 1169 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 TRIP11Q15643 1979 aa21.99■■□□□ 1.11
CLPTM1-204ENST00000585961 GVINP1Q7Z2Y8 2422 aa21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 GJA1P17302 382 aa21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 MARCKSP29966 332 aaPredicted RBP21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 MCM4P33991 863 aa21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 ADCY1Q08828 1119 aa21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 STRN3Q13033 797 aa21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 GPIHBP1Q8IV16 184 aa21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 KIF2CQ99661 725 aa21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 SH2B1Q9NRF2 756 aaPredicted RBP21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 CNTN3Q9P232 1028 aa21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 NDRG2Q9UN36 371 aaKnown RBP21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 TIMM13Q9Y5L4 95 aaPredicted RBP21.98■■□□□ 1.11
CLPTM1-204ENST00000585961 SYN3O14994 580 aa21.97■■□□□ 1.11
CLPTM1-204ENST00000585961 KINO60870 393 aaKnown RBP21.97■■□□□ 1.11
CLPTM1-204ENST00000585961 CACNB1Q02641 598 aaPredicted RBP21.97■■□□□ 1.11
CLPTM1-204ENST00000585961 PRSS36Q5K4E3 855 aa21.97■■□□□ 1.11
CLPTM1-204ENST00000585961 CYP4A22Q5TCH4 519 aa21.97■■□□□ 1.11
CLPTM1-204ENST00000585961 ZNF852Q6ZMS4 543 aa21.97■■□□□ 1.11
CLPTM1-204ENST00000585961 RNF19BQ6ZMZ0 732 aa21.97■■□□□ 1.11
CLPTM1-204ENST00000585961 ERMP1Q7Z2K6 904 aa21.97■■□□□ 1.11
CLPTM1-204ENST00000585961 TCEAL8Q8IYN2 117 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms