RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SLC38A7Q9NVC3 462 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 SPATA6Q9NWH7 488 aaPredicted RBP15.88■□□□□ 0.13
SDF2-202ENST00000585428 LRWD1Q9UFC0 647 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 DOCK6Q96HP0 2047 aa15.88■□□□□ 0.13
SDF2-202ENST00000585428 GVINP1Q7Z2Y8 2422 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 WDR27A2RRH5 827 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 ABLIM1O14639 778 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 MEFVO15553 781 aaPredicted RBP15.87■□□□□ 0.13
SDF2-202ENST00000585428 KINO60870 393 aaKnown RBP15.87■□□□□ 0.13
SDF2-202ENST00000585428 SEC24AO95486 1093 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 RPL9P32969 192 aaKnown RBP15.87■□□□□ 0.13
SDF2-202ENST00000585428 RPS9P46781 194 aaKnown RBP15.87■□□□□ 0.13
SDF2-202ENST00000585428 YARSP54577 528 aaKnown RBP15.87■□□□□ 0.13
SDF2-202ENST00000585428 PEX3P56589 373 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 ROR1Q01973 937 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 CSTF1Q05048 431 aaKnown RBP15.87■□□□□ 0.13
SDF2-202ENST00000585428 VARS2Q5ST30 1063 aaKnown RBP15.87■□□□□ 0.13
SDF2-202ENST00000585428 ZNF687Q8N1G0 1237 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 ZBTB44Q8NCP5 570 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 CCDC94Q9BW85 323 aaPredicted RBP15.87■□□□□ 0.13
SDF2-202ENST00000585428 TARS2Q9BW92 718 aaKnown RBP15.87■□□□□ 0.13
SDF2-202ENST00000585428 DLL3Q9NYJ7 618 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 ARHGAP28Q9P2N2 729 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 RBM19Q9Y4C8 960 aaKnown RBP15.87■□□□□ 0.13
SDF2-202ENST00000585428 PCDHGA2Q9Y5H1 932 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 STK24Q9Y6E0 443 aa15.87■□□□□ 0.13
SDF2-202ENST00000585428 NOTCH4Q99466 2003 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 CCDC169A6NNP5 214 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 PODXLO00592 558 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 NRG2O14511 850 aaPredicted RBP15.86■□□□□ 0.13
SDF2-202ENST00000585428 SYN3O14994 580 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 LILRB5O75023 590 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 SEC24BO95487 1268 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 FCARP24071 287 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 U2AF2P26368 475 aaKnown RBP eCLIP15.86■□□□□ 0.13
SDF2-202ENST00000585428 TARSP26639 723 aaKnown RBP15.86■□□□□ 0.13
SDF2-202ENST00000585428 ELF1P32519 619 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 TOB1P50616 345 aaPredicted RBP15.86■□□□□ 0.13
SDF2-202ENST00000585428 OSTNP61366 133 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 PUM1Q14671 1186 aaKnown RBP eCLIP15.86■□□□□ 0.13
SDF2-202ENST00000585428 ZNF852Q6ZMS4 543 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 MAMSTRQ6ZN01 415 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 C1orf186Q6ZWK4 172 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 ACAP3Q96P50 834 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 MRPL4Q9BYD3 311 aaKnown RBP15.86■□□□□ 0.13
SDF2-202ENST00000585428 HEBP1Q9NRV9 189 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 CNTN3Q9P232 1028 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 FBXL5Q9UKA1 691 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 DNM3Q9UQ16 869 aa15.86■□□□□ 0.13
SDF2-202ENST00000585428 E9PMD0 336 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 H7C4K7 107 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 ZNF197O14709 1029 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 NCAM2O15394 837 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 HIP1RO75146 1068 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 LRG1P02750 347 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 MCF2P10911 925 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 CEBPBP17676 345 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 CCR2P41597 374 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 ADCY1Q08828 1119 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 MAPK7Q13164 816 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 PTGDRQ13258 359 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 NBR1Q14596 966 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 IL17AQ16552 155 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 FAM78AQ5JUQ0 283 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 TPGS2Q68CL5 300 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 RINT1Q6NUQ1 792 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 TPRG1Q6ZUI0 275 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 DGLUCYQ7Z3D6 616 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 CCDC83Q8IWF9 413 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 ATRIPQ8WXE1 791 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 C18orf25Q96B23 403 aaPredicted RBP15.85■□□□□ 0.13
SDF2-202ENST00000585428 TCEAL4Q96EI5 215 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 CORO1BQ9BR76 489 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 C17orf75Q9HAS0 396 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 ZSCAN32Q9NX65 697 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 MAFFQ9ULX9 164 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 COL4A3Q01955 1670 aa15.85■□□□□ 0.13
SDF2-202ENST00000585428 EP300Q09472 2414 aaPredicted RBP15.85■□□□□ 0.13
SDF2-202ENST00000585428 VWA8A3KMH1 1905 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 MED19A0JLT2 244 aaPredicted RBP15.84■□□□□ 0.13
SDF2-202ENST00000585428 PRRG1O14668 218 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 SPTLC1O15269 473 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 SLC10A6Q3KNW5 377 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 ZNF568Q3ZCX4 644 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 MAP4K3Q8IVH8 894 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 DNASE1L2Q92874 299 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 ZBTB45Q96K62 511 aaPredicted RBP15.84■□□□□ 0.13
SDF2-202ENST00000585428 SUSD3Q96L08 255 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 ZSWIM3Q96MP5 696 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 ASB16Q96NS5 453 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 HINFPQ9BQA5 517 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 TCHPQ9BT92 498 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 MMTAG2Q9BU76 263 aaKnown RBP15.84■□□□□ 0.13
SDF2-202ENST00000585428 CYP4F11Q9HBI6 524 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 ZFP14Q9HCL3 533 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 TRPV5Q9NQA5 729 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 KMT5AQ9NQR1 393 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 MRPS17Q9Y2R5 130 aaKnown RBP15.84■□□□□ 0.13
SDF2-202ENST00000585428 PCDHB6Q9Y5E3 794 aa15.84■□□□□ 0.13
SDF2-202ENST00000585428 DNAH14Q0VDD8 3507 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms