RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TRAPPC12Q8WVT3 735 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 HERVK_113Q902F9 699 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 SECISBP2LQ93073 1101 aaKnown RBP11.2□□□□□ -0.62
LIG3-203ENST00000585370 VWCEQ96DN2 955 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 ZBTB45Q96K62 511 aaPredicted RBP11.2□□□□□ -0.62
LIG3-203ENST00000585370 CALR3Q96L12 384 aaKnown RBP11.2□□□□□ -0.62
LIG3-203ENST00000585370 NLRP4Q96MN2 994 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 CGRRF1Q99675 332 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 NAPGQ99747 312 aaPredicted RBP11.2□□□□□ -0.62
LIG3-203ENST00000585370 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.2□□□□□ -0.62
LIG3-203ENST00000585370 HIPK3Q9H422 1215 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 PTPRHQ9HD43 1115 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 IL23AQ9NPF7 189 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 ADAMTS1Q9UHI8 967 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 AKT3Q9Y243 479 aa11.2□□□□□ -0.62
LIG3-203ENST00000585370 UQCRHLA0A096LP55 91 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 ANO9A1A5B4 782 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 MBLAC1A4D2B0 266 aaPredicted RBP11.19□□□□□ -0.62
LIG3-203ENST00000585370 HAS3O00219 553 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 ZNF263O14978 683 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 C4BPAP04003 597 aaKnown RBP11.19□□□□□ -0.62
LIG3-203ENST00000585370 RPLP2P05387 115 aaKnown RBP11.19□□□□□ -0.62
LIG3-203ENST00000585370 UQCRHP07919 91 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 MCF2P10911 925 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 TNFAIP3P21580 790 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 ACOT2P49753 483 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 PSEN2P49810 448 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 CCL23P55773 120 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 NLRP11P59045 1033 aaKnown RBP11.19□□□□□ -0.62
LIG3-203ENST00000585370 APBA1Q02410 837 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 ARID5AQ03989 594 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 GFPT1Q06210 699 aaPredicted RBP11.19□□□□□ -0.62
LIG3-203ENST00000585370 MFSD10Q14728 455 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 KIAA0753Q2KHM9 967 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 PSRC1Q6PGN9 363 aaPredicted RBP11.19□□□□□ -0.62
LIG3-203ENST00000585370 ZNF571Q7Z3V5 609 aaPredicted RBP11.19□□□□□ -0.62
LIG3-203ENST00000585370 WDR49Q8IV35 697 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 KIAA0319LQ8IZA0 1049 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 SLC35F6Q8N357 371 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 USP38Q8NB14 1042 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 FAXDC2Q96IV6 333 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 ALS2CR12Q96Q35 445 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 WDR24Q96S15 920 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 GCOM2Q9BZD3 368 aaPredicted RBP11.19□□□□□ -0.62
LIG3-203ENST00000585370 WNT8AQ9H1J5 351 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 IFT122Q9HBG6 1241 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 ANKFY1Q9P2R3 1169 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 CPSF3Q9UKF6 684 aaKnown RBP11.19□□□□□ -0.62
LIG3-203ENST00000585370 TRANK1O15050 2925 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 SIP14410 1827 aa11.19□□□□□ -0.62
LIG3-203ENST00000585370 CNTNAP2Q9UHC6 1331 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 A0A087WZ62 844 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 A0A087X0T9 212 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 FOXN3O00409 490 aaPredicted RBP11.18□□□□□ -0.62
LIG3-203ENST00000585370 ABLIM1O14639 778 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 CTIFO43310 598 aaKnown RBP11.18□□□□□ -0.62
LIG3-203ENST00000585370 FGBP02675 491 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 CLTAP09496 248 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 FAM228BP0C875 321 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 SMIM10L2AP0DMW4 78 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 SMIM10L2BP0DMW5 78 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 TBXAS1P24557 533 aaPredicted RBP11.18□□□□□ -0.62
LIG3-203ENST00000585370 ARHGAP44Q17R89 818 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 DUOXA2Q1HG44 320 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 MARCH8Q5T0T0 291 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 NFRKBQ6P4R8 1299 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 ALKBH5Q6P6C2 394 aaKnown RBP11.18□□□□□ -0.62
LIG3-203ENST00000585370 GJB7Q6PEY0 223 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 OTOP2Q7RTS6 562 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 CD302Q8IX05 232 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 FAM71AQ8IYT1 594 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 PPM1KQ8N3J5 372 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 LMBR1Q8WVP7 490 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 SHC3Q92529 594 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 ZNF516Q92618 1163 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 KAT2BQ92831 832 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 SEMA4DQ92854 862 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 NOX5Q96PH1 765 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 POP1Q99575 1024 aaKnown RBP11.18□□□□□ -0.62
LIG3-203ENST00000585370 FDXACB1Q9BRP7 624 aaPredicted RBP11.18□□□□□ -0.62
LIG3-203ENST00000585370 SEZ6LQ9BYH1 1024 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 IMPG2Q9BZV3 1241 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 HAPLN2Q9GZV7 340 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 LACRTQ9GZZ8 138 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 PDE11AQ9HCR9 933 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 C1orf112Q9NSG2 853 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 TRMT13Q9NUP7 481 aaKnown RBP11.18□□□□□ -0.62
LIG3-203ENST00000585370 NAGPAQ9UK23 515 aa11.18□□□□□ -0.62
LIG3-203ENST00000585370 A0A0A6YYK5 440 aaPredicted RBP11.17□□□□□ -0.62
LIG3-203ENST00000585370 FAM189A1O60320 539 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 PHACTR2O75167 634 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 HLA-DRAP01903 254 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 MYL3P08590 195 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 H2AFZP0C0S5 128 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 GZMAP12544 262 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 PRLRP16471 622 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 AXLP30530 894 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 PURAQ00577 322 aaKnown RBP11.17□□□□□ -0.62
LIG3-203ENST00000585370 BIRC3Q13489 604 aa11.17□□□□□ -0.62
LIG3-203ENST00000585370 SGSM1Q2NKQ1 1148 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms