RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 KCNN4O15554 427 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 NMT2O60551 498 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 ARPP19P56211 112 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 ARHGAP27Q6ZUM4 889 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 CD248Q9HCU0 757 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 MAD2L2Q9UI95 211 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 FHOD1Q9Y613 1164 aa13.72□□□□□ -0.21
RNF43-208ENST00000584437 METP08581 1390 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 DMC1Q14565 340 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 MXD4Q14582 209 aaPredicted RBP13.71□□□□□ -0.21
RNF43-208ENST00000584437 TRAPPC11Q7Z392 1133 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 PPHLN1Q8NEY8 458 aaKnown RBP13.71□□□□□ -0.21
RNF43-208ENST00000584437 NSUN6Q8TEA1 469 aaKnown RBP13.71□□□□□ -0.21
RNF43-208ENST00000584437 ERGIC2Q96RQ1 377 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 XPO7Q9UIA9 1087 aaKnown RBP13.71□□□□□ -0.21
RNF43-208ENST00000584437 PRLRP16471 622 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 RUNX1T1Q06455 604 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 PTK2BQ14289 1009 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 C4orf22Q6V702 233 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 RRM2BQ7LG56 351 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 CYGBQ8WWM9 190 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 PGBD4Q96DM1 585 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 CPVLQ9H3G5 476 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 STILQ15468 1287 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 QRICH1Q2TAL8 776 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 TTC39BQ5VTQ0 682 aaPredicted RBP13.71□□□□□ -0.21
RNF43-208ENST00000584437 C18orf8Q96DM3 657 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 CARD9Q9H257 536 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.71□□□□□ -0.21
RNF43-208ENST00000584437 CDYLQ9Y232 598 aa13.71□□□□□ -0.21
RNF43-208ENST00000584437 O00370 1275 aa13.71□□□□□ -0.22
RNF43-208ENST00000584437 SESN2P58004 480 aaPredicted RBP13.71□□□□□ -0.22
RNF43-208ENST00000584437 SZRD1Q7Z422 152 aa13.71□□□□□ -0.22
RNF43-208ENST00000584437 NEDD1Q8NHV4 660 aa13.71□□□□□ -0.22
RNF43-208ENST00000584437 E2F7Q96AV8 911 aa13.71□□□□□ -0.22
RNF43-208ENST00000584437 NR1H4Q96RI1 486 aaPredicted RBP13.71□□□□□ -0.22
RNF43-208ENST00000584437 EPAS1Q99814 870 aa13.71□□□□□ -0.22
RNF43-208ENST00000584437 POLR3FQ9H1D9 316 aaPredicted RBP13.71□□□□□ -0.22
RNF43-208ENST00000584437 PABPC3Q9H361 631 aaKnown RBP13.71□□□□□ -0.22
RNF43-208ENST00000584437 CASS4Q9NQ75 786 aa13.71□□□□□ -0.22
RNF43-208ENST00000584437 AIPL1Q9NZN9 384 aa13.71□□□□□ -0.22
RNF43-208ENST00000584437 PAK5Q9P286 719 aa13.71□□□□□ -0.22
RNF43-208ENST00000584437 DNAJC5BQ9UF47 199 aa13.71□□□□□ -0.22
RNF43-208ENST00000584437 WEE2P0C1S8 567 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 SPRP35270 261 aaPredicted RBP13.7□□□□□ -0.22
RNF43-208ENST00000584437 FNTAP49354 379 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 SLC29A2Q14542 456 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 EEPD1Q7L9B9 569 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 PRPF39Q86UA1 669 aaKnown RBP13.7□□□□□ -0.22
RNF43-208ENST00000584437 ASAP3Q8TDY4 903 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 ZNF341Q9BYN7 854 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 ZNF302Q9NR11 478 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 AP4S1Q9Y587 144 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 EFCAB6Q5THR3 1501 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 ZNF197O14709 1029 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 MYL2P10916 166 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 PRDX5P30044 214 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 TSPY1Q01534 308 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 ZCWPW2Q504Y3 356 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 LRRC34Q8IZ02 419 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 ADGRF4Q8IZF3 695 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 SARS2Q9NP81 518 aaKnown RBP13.7□□□□□ -0.22
RNF43-208ENST00000584437 OLFML3Q9NRN5 406 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 RAB6BQ9NRW1 208 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 C20orf96Q9NUD7 363 aaPredicted RBP13.7□□□□□ -0.22
RNF43-208ENST00000584437 MARCOQ9UEW3 520 aaPredicted RBP13.7□□□□□ -0.22
RNF43-208ENST00000584437 L1RE1Q9UN81 338 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 NEMP1O14524 444 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 AIM2O14862 343 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 ZSCAN9O15535 394 aaPredicted RBP13.7□□□□□ -0.22
RNF43-208ENST00000584437 APRTP07741 180 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 GUCY1A2P33402 732 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 RECQLP46063 649 aaPredicted RBP13.7□□□□□ -0.22
RNF43-208ENST00000584437 ERFP50548 548 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 SKOR1P84550 965 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 KRT33BQ14525 404 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 DDHD1Q8NEL9 900 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 SP110Q9HB58 689 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 SCN3BQ9NY72 215 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 KCND2Q9NZV8 630 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 SUGT1Q9Y2Z0 365 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 ATP9BO43861 1147 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 ITGA8P53708 1063 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 Q3C1V9 767 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 EAPPQ56P03 285 aaPredicted RBP13.7□□□□□ -0.22
RNF43-208ENST00000584437 DPY19L2Q6NUT2 758 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 GALNT4Q8N4A0 578 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 PCMTD2Q9NV79 361 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 NEO1Q92859 1461 aa13.7□□□□□ -0.22
RNF43-208ENST00000584437 CEP170Q5SW79 1584 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 UBA6A0AVT1 1052 aaPredicted RBP13.69□□□□□ -0.22
RNF43-208ENST00000584437 SCTRP47872 440 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 NUP107P57740 925 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 CNBD2Q96M20 576 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 PPP1R16BQ96T49 567 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 PNKPQ96T60 521 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 VPS33BQ9H267 617 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 BCS1LQ9Y276 419 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 NLRP1Q9C000 1473 aa13.69□□□□□ -0.22
RNF43-208ENST00000584437 MROH7-TTC4A0A0A0MT08 1334 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms