RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 CCDC13Q8IYE1 715 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 LRRC57Q8N9N7 239 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ZNF280CQ8ND82 737 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 LNX1Q8TBB1 728 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 DCPSQ96C86 337 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ISCUQ9H1K1 167 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ZNF408Q9H9D4 720 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 HAUS2Q9NVX0 235 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PTPN22Q9Y2R2 807 aa12.38□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TMEM238LA0A1B0GVL6 79 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 EVI5O60447 810 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 H2AFZP0C0S5 128 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 RANBP1P43487 201 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MARCKSL1P49006 195 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 FNTAP49354 379 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 C16orf54Q6UWD8 224 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 H2AFVQ71UI9 128 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 OTOP1Q7RTM1 612 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SPATA21Q7Z572 469 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 FAM160B2Q86V87 743 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 APOBEC3FQ8IUX4 373 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 OLIG1Q8TAK6 271 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SLC35G2Q8TBE7 412 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 WHAMMQ8TF30 809 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 RAPGEF5Q92565 580 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CABS1Q96KC9 395 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SCHIP1Q9P0W5 487 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TRAF3IP3Q9Y228 551 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 H0YGN5 161 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ATP6V1G1O75348 118 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 FAM13AO94988 1023 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CPP00450 1065 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CALCAP01258 141 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 HSPA9P38646 679 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 BACE1P56817 501 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 DLG4P78352 724 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 EDRF1Q3B7T1 1238 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 DCAF12L1Q5VU92 463 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CPLX4Q7Z7G2 160 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SCYL3Q8IZE3 742 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 IL31RAQ8NI17 732 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ERMNQ8TAM6 284 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SCFD2Q8WU76 684 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 BTBD6Q96KE9 485 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.37□□□□□ -0.434e-16■□□□□ 11
CDK5RAP3-231ENST00000584063 PRKAG2Q9UGJ0 569 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 NFS1Q9Y697 457 aa12.37□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PSME4Q14997 1843 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 LILRB3O75022 631 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 GNA14O95837 355 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MYCP01106 439 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 GEMIN4P57678 1058 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ARHGEF6Q15052 776 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 RASA2Q15283 850 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 CCDC121Q6ZUS5 278 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MGARPQ8TDB4 240 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 IQCDQ96DY2 449 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 HSD17B14Q9BPX1 270 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 OSBPL7Q9BZF2 842 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 THAP2Q9H0W7 228 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TRPC6Q9Y210 931 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SSX2IPQ9Y2D8 614 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PITPNM2Q9BZ72 1349 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 GMNCA6NCL1 334 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 WDR46O15213 610 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PECAM1P16284 738 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SP4Q02446 784 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MRPL28Q13084 256 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 DRAP1Q14919 205 aaPredicted RBP12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SUN5Q8TC36 379 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 C18orf8Q96DM3 657 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 FIZ1Q96SL8 496 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 KIAA1683Q9H0B3 1180 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 FANCFQ9NPI8 374 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TYW1Q9NV66 732 aaKnown RBP12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TMEM59LQ9UK28 342 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PRELID1Q9Y255 219 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 RIPK3Q9Y572 518 aa12.36□□□□□ -0.43
CDK5RAP3-231ENST00000584063 POM121CA8CG34 1229 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 EYA4O95677 639 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 FAM107AO95990 144 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 TNFRSF8P28908 595 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 KCNJ1P48048 391 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 IFI35P80217 286 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MAP3K10Q02779 954 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SUPT20HL1Q3ZLR7 823 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 DPY19L2Q6NUT2 758 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 C1orf186Q6ZWK4 172 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 FRMD5Q7Z6J6 570 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 NT5DC3Q86UY8 548 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ARMC2Q8NEN0 867 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 PARD3BQ8TEW8 1205 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 SLC20A1Q8WUM9 679 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 ZNF75CPQ92670 426 aaPredicted RBP12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 KLRG1Q96E93 195 aa12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 POP1Q99575 1024 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 MAK16Q9BXY0 300 aaKnown RBP12.35□□□□□ -0.43
CDK5RAP3-231ENST00000584063 EDEM3Q9BZQ6 932 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms