RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 TAS1R3Q7RTX0 852 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 TMEM130Q8N3G9 435 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 LINC00301Q8NCQ3 95 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 PJA1Q8NG27 643 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 CLIC6Q96NY7 704 aa17.16■□□□□ 0.34
SKA2-209ENST00000583976 FBXO2Q9UK22 296 aaPredicted RBP17.16■□□□□ 0.34
SKA2-209ENST00000583976 SRPRBQ9Y5M8 271 aaKnown RBP17.16■□□□□ 0.34
SKA2-209ENST00000583976 CITO14578 2027 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 SPTLC2O15270 562 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 MEFVO15553 781 aaPredicted RBP17.15■□□□□ 0.34
SKA2-209ENST00000583976 PEX3P56589 373 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 ELAVL2Q12926 359 aaKnown RBP17.15■□□□□ 0.34
SKA2-209ENST00000583976 RAB33AQ14088 237 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 UPP1Q16831 310 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 SLC5A9Q2M3M2 681 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 PHLDB3Q6NSJ2 640 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 IFT74Q96LB3 600 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 PLIN2Q99541 437 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 MMTAG2Q9BU76 263 aaKnown RBP17.15■□□□□ 0.34
SKA2-209ENST00000583976 RUSC1Q9BVN2 902 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 DNMT3BQ9UBC3 853 aaKnown RBP17.15■□□□□ 0.34
SKA2-209ENST00000583976 CFAP45Q9UL16 551 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 KIAA1024Q9UPX6 916 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 ATP6V1DQ9Y5K8 247 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 STK24Q9Y6E0 443 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 OTOGLQ3ZCN5 2332 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 COL4A2P08572 1712 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 GPR179Q6PRD1 2367 aa17.15■□□□□ 0.34
SKA2-209ENST00000583976 E9PMD0 336 aa17.14■□□□□ 0.33
SKA2-209ENST00000583976 NRG2O14511 850 aaPredicted RBP17.14■□□□□ 0.33
SKA2-209ENST00000583976 XYLBO75191 536 aa17.14■□□□□ 0.33
SKA2-209ENST00000583976 HARSP12081 509 aaKnown RBP17.14■□□□□ 0.33
SKA2-209ENST00000583976 LONP1P36776 959 aaKnown RBP17.14■□□□□ 0.33
SKA2-209ENST00000583976 NPTX2P47972 431 aa17.14■□□□□ 0.33
SKA2-209ENST00000583976 ROR1Q01973 937 aa17.14■□□□□ 0.33
SKA2-209ENST00000583976 MAPK7Q13164 816 aa17.14■□□□□ 0.33
SKA2-209ENST00000583976 SNW1Q13573 536 aaKnown RBP17.14■□□□□ 0.33
SKA2-209ENST00000583976 PABPC1LQ4VXU2 614 aaKnown RBP17.14■□□□□ 0.33
SKA2-209ENST00000583976 ATL3Q6DD88 541 aa17.14■□□□□ 0.33
SKA2-209ENST00000583976 KCNK18Q7Z418 384 aa17.14■□□□□ 0.33
SKA2-209ENST00000583976 KIFAP3Q92845 792 aa17.14■□□□□ 0.33
SKA2-209ENST00000583976 ZMAT2Q96NC0 199 aaKnown RBP17.14■□□□□ 0.33
SKA2-209ENST00000583976 SIT1Q9Y3P8 196 aa17.14■□□□□ 0.33
SKA2-209ENST00000583976 CACNA1IQ9P0X4 2223 aa17.14■□□□□ 0.33
SKA2-209ENST00000583976 CACNA1AO00555 2505 aa17.14■□□□□ 0.33
SKA2-209ENST00000583976 SMIM28A0A1B0GU29 152 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 CCDC169A6NNP5 214 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 ABLIM1O14639 778 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 HIP1RO75146 1068 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 YEATS4O95619 227 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 SP9P0CG40 484 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 CEBPBP17676 345 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 UBA7P41226 1012 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 GRM5P41594 1212 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 EFNA5P52803 228 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 KRT85P78386 507 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 PDXDC1Q6P996 788 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 KRI1Q8N9T8 703 aaKnown RBP17.13■□□□□ 0.33
SKA2-209ENST00000583976 AK8Q96MA6 479 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 TARS2Q9BW92 718 aaKnown RBP17.13■□□□□ 0.33
SKA2-209ENST00000583976 ARHGAP28Q9P2N2 729 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 TNFSF13BQ9Y275 285 aa17.13■□□□□ 0.33
SKA2-209ENST00000583976 MTF2Q9Y483 593 aaPredicted RBP17.13■□□□□ 0.33
SKA2-209ENST00000583976 ZFP37Q9Y6Q3 630 aaPredicted RBP17.13■□□□□ 0.33
SKA2-209ENST00000583976 WDR27A2RRH5 827 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 PODXLO00592 558 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 PPP6R2O75170 966 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 RHOP08100 348 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 POU2F2P09086 479 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 CD72P21854 359 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 STARD6P59095 220 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 MLF2Q15773 248 aaPredicted RBP17.12■□□□□ 0.33
SKA2-209ENST00000583976 VARS2Q5ST30 1063 aaKnown RBP17.12■□□□□ 0.33
SKA2-209ENST00000583976 USP49Q70CQ1 688 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 MTSS1LQ765P7 747 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 MAML2Q8IZL2 1156 aaPredicted RBP17.12■□□□□ 0.33
SKA2-209ENST00000583976 RASSF8Q8NHQ8 419 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 C18orf25Q96B23 403 aaPredicted RBP17.12■□□□□ 0.33
SKA2-209ENST00000583976 EPSTI1Q96J88 318 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 CDK5RAP3Q96JB5 506 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 IPO9Q96P70 1041 aaKnown RBP17.12■□□□□ 0.33
SKA2-209ENST00000583976 ACO2Q99798 780 aaKnown RBP17.12■□□□□ 0.33
SKA2-209ENST00000583976 PTPRHQ9HD43 1115 aa17.12■□□□□ 0.33
SKA2-209ENST00000583976 K7ERI5 159 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 MUTP22033 750 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 ME1P48163 572 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 DMP1Q13316 513 aaPredicted RBP17.11■□□□□ 0.33
SKA2-209ENST00000583976 UBXN2BQ14CS0 331 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 KARSQ15046 597 aaKnown RBP17.11■□□□□ 0.33
SKA2-209ENST00000583976 SEZ6Q53EL9 994 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 XKR4Q5GH76 650 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 ANKS3Q6ZW76 656 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 C1orf210Q8IVY1 113 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 SPATA32Q96LK8 384 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 UROC1Q96N76 676 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 PNMA5Q96PV4 448 aa17.11■□□□□ 0.33
SKA2-209ENST00000583976 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
SKA2-209ENST00000583976 MRPL4Q9BYD3 311 aaKnown RBP17.11■□□□□ 0.33
SKA2-209ENST00000583976 PLA2G2FQ9BZM2 168 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms