RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 CELF5Q8N6W0 485 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 ZFP28Q8NHY6 868 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 Q8TCH9 128 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 ATXN2LQ8WWM7 1075 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 PGBD4Q96DM1 585 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 MTFMTQ96DP5 389 aaKnown RBP7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 FAM167AQ96KS9 214 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 NDC1Q9BTX1 674 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 SARGQ9BW04 601 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 FBXO34Q9NWN3 711 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 PCDHA6Q9UN73 950 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 L1RE1Q9UN81 338 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 PCDHGB6Q9Y5F9 930 aa7.05□□□□□ -1.28
SMARCE1-219ENST00000583294 CFAP69A5D8W1 941 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 PATE3B3GLJ2 98 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 POMCP01189 267 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 MTHFD1P11586 935 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 ACO1P21399 889 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 COMTP21964 271 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 PRDX5P30044 214 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 UBXN2BQ14CS0 331 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 CNN3Q15417 329 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 SPATS1Q496A3 300 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 DACT2Q5SW24 774 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 CCSAPQ6IQ19 270 aaPredicted RBP7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 GPRIN1Q7Z2K8 1008 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 PPP1R3BQ86XI6 285 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 MDGA1Q8NFP4 955 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 TNPO1Q92973 898 aaKnown RBP7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 TTC17Q96AE7 1141 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 MIEF2Q96C03 454 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 LOXL4Q96JB6 756 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 PACSIN1Q9BY11 444 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 BHMT2Q9H2M3 363 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 GSTO2Q9H4Y5 243 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 WDCPQ9H6R7 721 aa7.04□□□□□ -1.28
SMARCE1-219ENST00000583294 APAF1O14727 1248 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 AHSGP02765 367 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 TRIM27P14373 513 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 SLC6A2P23975 617 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 SLC6A4P31645 630 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 RNF220Q5VTB9 566 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 DARS2Q6PI48 645 aaKnown RBP7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 Q6ZSN1 163 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 MAEAQ7L5Y9 396 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 ANKRD35Q8N283 1001 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 IL17RDQ8NFM7 739 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 OR10H5Q8NGA6 315 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 OR52N2Q8NGI0 321 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 MRPL46Q9H2W6 279 aaKnown RBP7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 ZMAT3Q9HA38 289 aaKnown RBP7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 SLC52A1Q9NWF4 448 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 ST6GALNAC2Q9UJ37 374 aa7.03□□□□□ -1.28
SMARCE1-219ENST00000583294 AMHP03971 560 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 ITGB1P05556 798 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 FTH1P19P0C7X4 201 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 KITP10721 976 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 PURAQ00577 322 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 CCDC93Q567U6 631 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 KHDC1LQ5JSQ8 128 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 MED25Q71SY5 747 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 FAM90A1Q86YD7 464 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 DNERQ8NFT8 737 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 BRIX1Q8TDN6 353 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 WWC2-AS2Q96NR7 200 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 APOL5Q9BWW9 433 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 DEF6Q9H4E7 631 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 SARS2Q9NP81 518 aaKnown RBP7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 DDX21Q9NR30 783 aaKnown RBP eCLIP7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 SLC45A2Q9UMX9 530 aa7.02□□□□□ -1.29
SMARCE1-219ENST00000583294 A0A1W2PPL8 197 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 K7ESM1 405 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 PLIN1O60240 522 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 HRGP04196 525 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 ALAS1P13196 640 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 HIBADHP31937 336 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 PIK3CGP48736 1102 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 CHN2P52757 468 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 NOMO3P69849 1222 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 FAM193AP78312 1265 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 GPSM2P81274 684 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 SAFBQ15424 915 aaKnown RBP eCLIP7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 VPS72Q15906 364 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 C1QL3Q5VWW1 255 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 ZNF585AQ6P3V2 769 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 MAMDC4Q6UXC1 1216 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 Q6ZRM9 215 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 FAM43AQ8N2R8 423 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 PJA1Q8NG27 643 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 FAM89AQ96GI7 184 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 GPR87Q9BY21 358 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 ATP6V0A4Q9HBG4 840 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 CNNM1Q9NRU3 951 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 GNL3LQ9NVN8 582 aaKnown RBP7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 CLCA2Q9UQC9 943 aa7.01□□□□□ -1.29
SMARCE1-219ENST00000583294 CDHR4A6H8M9 788 aa7□□□□□ -1.29
SMARCE1-219ENST00000583294 DRGXA6NNA5 263 aa7□□□□□ -1.29
SMARCE1-219ENST00000583294 GOLIM4O00461 696 aa7□□□□□ -1.29
SMARCE1-219ENST00000583294 PQBP1O60828 265 aaKnown RBP7□□□□□ -1.29
SMARCE1-219ENST00000583294 SLC43A1O75387 559 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms