RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 PIK3CAP42336 1068 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 MLLT1Q03111 559 aaPredicted RBP13.38□□□□□ -0.27
CDH8-208ENST00000582980 TUSC3Q13454 348 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 CBWD6Q4V339 395 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 CBWD3Q5JTY5 395 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 CBWD5Q5RIA9 395 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 RASIP1Q5U651 963 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 TDRD10Q5VZ19 366 aaKnown RBP13.38□□□□□ -0.27
CDH8-208ENST00000582980 FAM117BQ6P1L5 589 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 C15orf39Q6ZRI6 1047 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 TRAPPC11Q7Z392 1133 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 HERC6Q8IVU3 1022 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 CMTR2Q8IYT2 770 aaKnown RBP13.38□□□□□ -0.27
CDH8-208ENST00000582980 CCDC150Q8NCX0 1101 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 ZNF516Q92618 1163 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 UROC1Q96N76 676 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 CASD1Q96PB1 797 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 CXCL16Q9H2A7 254 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 GRPEL1Q9HAV7 217 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 TBC1D13Q9NVG8 400 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 MIOSQ9NXC5 875 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 DPP3Q9NY33 737 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 IFNKQ9P0W0 207 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 TUBGCP4Q9UGJ1 667 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 PLAGL2Q9UPG8 496 aa13.38□□□□□ -0.27
CDH8-208ENST00000582980 CARNS1A5YM72 827 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 ITGB3P05106 788 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 KRT19P08727 400 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 RPL9P32969 192 aaKnown RBP13.37□□□□□ -0.27
CDH8-208ENST00000582980 GATMP50440 423 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 AFF1P51825 1210 aaKnown RBP13.37□□□□□ -0.27
CDH8-208ENST00000582980 UBXN1Q04323 297 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 TRPC3Q13507 836 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 SHHQ15465 462 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 PAN2Q504Q3 1202 aaKnown RBP13.37□□□□□ -0.27
CDH8-208ENST00000582980 C9orf50Q5SZB4 431 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 GBP6Q6ZN66 633 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 C1orf127Q8N9H9 656 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 FBXL13Q8NEE6 735 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 C18orf25Q96B23 403 aaPredicted RBP13.37□□□□□ -0.27
CDH8-208ENST00000582980 ZNF689Q96CS4 500 aaPredicted RBP13.37□□□□□ -0.27
CDH8-208ENST00000582980 DDX27Q96GQ7 796 aaKnown RBP13.37□□□□□ -0.27
CDH8-208ENST00000582980 IMPG2Q9BZV3 1241 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 TRIM5Q9C035 493 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 RTN4Q9NQC3 1192 aaKnown RBP13.37□□□□□ -0.27
CDH8-208ENST00000582980 GCNT4Q9P109 453 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 INSL6Q9Y581 213 aa13.37□□□□□ -0.27
CDH8-208ENST00000582980 TLL1O43897 1013 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 CLSTN1O94985 981 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 LRPAP1P30533 357 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 POLR2BP30876 1174 aaKnown RBP13.36□□□□□ -0.27
CDH8-208ENST00000582980 BMP8BP34820 402 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 PNPLA4P41247 253 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 MRE11P49959 708 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 RBP5P82980 135 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 HTRA4P83105 476 aaPredicted RBP13.36□□□□□ -0.27
CDH8-208ENST00000582980 DSC1Q08554 894 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 NCOA4Q13772 614 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 BTG3Q14201 252 aaPredicted RBP13.36□□□□□ -0.27
CDH8-208ENST00000582980 NAB2Q15742 525 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 EXOC3L4Q17RC7 722 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 LRRC52Q8N7C0 313 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 TAS1R2Q8TE23 839 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 ZNF560Q96MR9 790 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 RAD9AQ99638 391 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 XPO4Q9C0E2 1151 aaKnown RBP13.36□□□□□ -0.27
CDH8-208ENST00000582980 RC3H2Q9HBD1 1191 aaKnown RBP13.36□□□□□ -0.27
CDH8-208ENST00000582980 RAB20Q9NX57 234 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 COQ4Q9Y3A0 265 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 COL4A6Q14031 1691 aa13.36□□□□□ -0.27
CDH8-208ENST00000582980 ANO9A1A5B4 782 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 CASTOR2A6NHX0 329 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 ZC3H11AO75152 810 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDH8-208ENST00000582980 HLA-DRAP01903 254 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 PAX3P23760 479 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 ATICP31939 592 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 GUCY2FP51841 1108 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 SOX4Q06945 474 aaPredicted RBP13.35□□□□□ -0.27
CDH8-208ENST00000582980 MYO1EQ12965 1108 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 NR1I3Q14994 352 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 EPC2Q52LR7 807 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 WDR44Q5JSH3 913 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 SPOUT1Q5T280 376 aaKnown RBP13.35□□□□□ -0.27
CDH8-208ENST00000582980 C9orf57Q5W0N0 161 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 TMCO2Q7Z6W1 182 aaPredicted RBP13.35□□□□□ -0.27
CDH8-208ENST00000582980 COLGALT2Q8IYK4 626 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 TAF4BQ92750 862 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 PCMTD1Q96MG8 357 aaPredicted RBP13.35□□□□□ -0.27
CDH8-208ENST00000582980 NAP1L5Q96NT1 182 aaPredicted RBP13.35□□□□□ -0.27
CDH8-208ENST00000582980 ERGIC2Q96RQ1 377 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 TMEM175Q9BSA9 504 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 NRDE2Q9H7Z3 1164 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 GOLGA2P5Q9HBQ8 144 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 AGAP1Q9UPQ3 857 aa13.35□□□□□ -0.27
CDH8-208ENST00000582980 A0A1W2PQC6 194 aa13.34□□□□□ -0.27
CDH8-208ENST00000582980 PODXLO00592 558 aa13.34□□□□□ -0.27
CDH8-208ENST00000582980 DDHD2O94830 711 aa13.34□□□□□ -0.27
CDH8-208ENST00000582980 VNN1O95497 513 aa13.34□□□□□ -0.27
CDH8-208ENST00000582980 STAU1O95793 577 aaKnown RBP13.34□□□□□ -0.27
CDH8-208ENST00000582980 ALDH2P05091 517 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms