RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TSHZ1Q6ZSZ6 1077 aa24.29■■□□□ 1.48
CCDC47-204ENST00000582252 RASGEF1CQ8N431 466 aa24.29■■□□□ 1.48
CCDC47-204ENST00000582252 NLRP4Q96MN2 994 aa24.29■■□□□ 1.48
CCDC47-204ENST00000582252 GOLPH3Q9H4A6 298 aa24.29■■□□□ 1.48
CCDC47-204ENST00000582252 SRRDQ9UH36 339 aa24.29■■□□□ 1.48
CCDC47-204ENST00000582252 MIF4GDA9UHW6 222 aaKnown RBP24.28■■□□□ 1.48
CCDC47-204ENST00000582252 FKTNO75072 461 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 VNN1O95497 513 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 C22orf31O95567 290 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 TNFRSF8P28908 595 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 PHKA2P46019 1235 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 CUL2Q13617 745 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 ZBTB41Q5SVQ8 909 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 PPP1R2P3Q6NXS1 205 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 ZBTB33Q86T24 672 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 TRIB2Q92519 343 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 TRIM11Q96F44 468 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 BEGAINQ9BUH8 593 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 FZD8Q9H461 694 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 PRMT7Q9NVM4 692 aaPredicted RBP24.28■■□□□ 1.48
CCDC47-204ENST00000582252 UVRAGQ9P2Y5 699 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 GTF3C4Q9UKN8 822 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 KAT6AQ92794 2004 aa24.28■■□□□ 1.48
CCDC47-204ENST00000582252 CCDC188H7C350 402 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 INO80B-WBP1J3KQ70 363 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 TMOD1P28289 359 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 WNT7BP56706 349 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 PTENP60484 403 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 CAP1Q01518 475 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 CASP8Q14790 479 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 ATF7IP2Q5U623 682 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 ACAD10Q6JQN1 1059 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 OR6J1Q8NGC5 347 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 TRAPPC12Q8WVT3 735 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 DDX1Q92499 740 aaKnown RBP24.27■■□□□ 1.48
CCDC47-204ENST00000582252 NAP1L3Q99457 506 aaPredicted RBP24.27■■□□□ 1.48
CCDC47-204ENST00000582252 INO80BQ9C086 356 aaPredicted RBP24.27■■□□□ 1.48
CCDC47-204ENST00000582252 VIPAS39Q9H9C1 493 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 PTPRJQ12913 1337 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 CLSTN1O94985 981 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 CLTAP09496 248 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 C1QTNF8P60827 252 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 NCOA4Q13772 614 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 CLEC16AQ2KHT3 1053 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 IFT20Q8IY31 132 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 UBL4BQ8N7F7 174 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 AFG1LQ8WV93 481 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 CARD9Q9H257 536 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 TMEM59LQ9UK28 342 aa24.27■■□□□ 1.48
CCDC47-204ENST00000582252 TTC7AQ9ULT0 858 aaPredicted RBP24.27■■□□□ 1.48
CCDC47-204ENST00000582252 FAM189A1O60320 539 aa24.26■■□□□ 1.47
CCDC47-204ENST00000582252 PPFIA4O75335 1185 aa24.26■■□□□ 1.47
CCDC47-204ENST00000582252 CYP1A2P05177 515 aa24.26■■□□□ 1.47
CCDC47-204ENST00000582252 INSRRP14616 1297 aa24.26■■□□□ 1.47
CCDC47-204ENST00000582252 PROZP22891 400 aa24.26■■□□□ 1.47
CCDC47-204ENST00000582252 CLCN3P51790 818 aa24.26■■□□□ 1.47
CCDC47-204ENST00000582252 NOP14P78316 857 aaKnown RBP24.26■■□□□ 1.47
CCDC47-204ENST00000582252 GABPB1Q06547 395 aaPredicted RBP24.26■■□□□ 1.47
CCDC47-204ENST00000582252 SMC1AQ14683 1233 aaKnown RBP24.26■■□□□ 1.47
CCDC47-204ENST00000582252 ZNF568Q3ZCX4 644 aa24.26■■□□□ 1.47
CCDC47-204ENST00000582252 TRIM72Q6ZMU5 477 aa24.26■■□□□ 1.47
CCDC47-204ENST00000582252 ZNF653Q96CK0 615 aa24.26■■□□□ 1.47
CCDC47-204ENST00000582252 RPS6KC1Q96S38 1066 aa24.26■■□□□ 1.47
CCDC47-204ENST00000582252 RNPEPQ9H4A4 650 aa24.26■■□□□ 1.47
CCDC47-204ENST00000582252 CPSF3Q9UKF6 684 aaKnown RBP24.26■■□□□ 1.47
CCDC47-204ENST00000582252 GNEQ9Y223 722 aaKnown RBP24.26■■□□□ 1.47
CCDC47-204ENST00000582252 NOC2LQ9Y3T9 749 aaKnown RBP24.26■■□□□ 1.47
CCDC47-204ENST00000582252 MYBL1P10243 752 aa24.25■■□□□ 1.47
CCDC47-204ENST00000582252 TNNT3P45378 269 aaPredicted RBP24.25■■□□□ 1.47
CCDC47-204ENST00000582252 FAM187BQ17R55 369 aa24.25■■□□□ 1.47
CCDC47-204ENST00000582252 DUOXA2Q1HG44 320 aa24.25■■□□□ 1.47
CCDC47-204ENST00000582252 ZNF296Q8WUU4 475 aaPredicted RBP24.25■■□□□ 1.47
CCDC47-204ENST00000582252 COG5Q9UP83 839 aa24.25■■□□□ 1.47
CCDC47-204ENST00000582252 TNFSF13BQ9Y275 285 aa24.25■■□□□ 1.47
CCDC47-204ENST00000582252 PCDHB4Q9Y5E5 795 aa24.25■■□□□ 1.47
CCDC47-204ENST00000582252 ADCY6O43306 1168 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 AKR1A1P14550 325 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 IGBP1P78318 339 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 MBTD1Q05BQ5 628 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 IFNLR1Q8IU57 520 aaPredicted RBP24.24■■□□□ 1.47
CCDC47-204ENST00000582252 KRT12Q99456 494 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 DMGDHQ9UI17 866 aaKnown RBP24.24■■□□□ 1.47
CCDC47-204ENST00000582252 Q9Y3F1 56 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 EVPLQ92817 2033 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 TTLL13PA6NNM8 815 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 ABLIM1O14639 778 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 IL18RAPO95256 599 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 HOXD8P13378 290 aaPredicted RBP24.24■■□□□ 1.47
CCDC47-204ENST00000582252 CYBAP13498 195 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 TNFSF9P41273 254 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 EPHB4P54760 987 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 PPP2R5EQ16537 467 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 OR5B17Q8NGF7 314 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 ZNF564Q8TBZ8 553 aaPredicted RBP24.24■■□□□ 1.47
CCDC47-204ENST00000582252 UBXN6Q9BZV1 441 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 PTPRHQ9HD43 1115 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 ACP6Q9NPH0 428 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 ALG6Q9Y672 507 aa24.24■■□□□ 1.47
CCDC47-204ENST00000582252 CEP350Q5VT06 3117 aa24.23■■□□□ 1.47
CCDC47-204ENST00000582252 DDX3YO15523 660 aaKnown RBP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms