RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 MYRFQ9Y2G1 1151 aa5.87□□□□□ -1.47
SMCHD1-204ENST00000581226 USP15Q9Y4E8 981 aaPredicted RBP5.87□□□□□ -1.47
SMCHD1-204ENST00000581226 HK3P52790 923 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 PUM1Q14671 1186 aaKnown RBP eCLIP5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 MLC1Q15049 377 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 FAM102AQ5T9C2 384 aaPredicted RBP5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 TSHZ3Q63HK5 1081 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 SLC4A10Q6U841 1118 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 GDF7Q7Z4P5 450 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 HEATR3Q7Z4Q2 680 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 FMNL3Q8IVF7 1028 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 TCEAL8Q8IYN2 117 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 MYO1HQ8N1T3 1032 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 CAMKK1Q8N5S9 505 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 FITM2Q8N6M3 262 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 IL17RDQ8NFM7 739 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 ZNF503Q96F45 646 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 PACSIN1Q9BY11 444 aa5.86□□□□□ -1.47
SMCHD1-204ENST00000581226 CDHR4A6H8M9 788 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 AHRRA9YTQ3 701 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 F2RL2O00254 374 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 ZNF185O15231 689 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 HAUS5O94927 633 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 PRSS23O95084 383 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 ALDH2P05091 517 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 CKBP12277 381 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 SLC6A4P31645 630 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 SLC25A3Q00325 362 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 MINDY4Q4G0A6 757 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 FLYWCH1Q4VC44 716 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 PDCD4Q53EL6 469 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 AGAP9Q5VTM2 703 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 METRNLQ641Q3 311 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 NXNQ6DKJ4 435 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 B3GNT9Q6UX72 402 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 RHOT2Q8IXI1 618 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 SH2D3CQ8N5H7 860 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 MAGEB6Q8N7X4 407 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 TBC1D15Q8TC07 691 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 CACTINQ8WUQ7 758 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 TAAR9Q96RI9 348 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 NEU1Q99519 415 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 ZNF341Q9BYN7 854 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 VPS11Q9H270 941 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 ZNF768Q9H5H4 540 aaKnown RBP5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 ABCF2Q9UG63 623 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 ATP11BQ9Y2G3 1177 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 CHST2Q9Y4C5 530 aa5.85□□□□□ -1.47
SMCHD1-204ENST00000581226 MATN3O15232 486 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 CTNND1O60716 968 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 SLC43A1O75387 559 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 RPS6KA4O75676 772 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 SPATA31D3P0C874 917 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 LSM12Q3MHD2 195 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 MIIPQ5JXC2 388 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 UTP14CQ5TAP6 766 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 SPATA31D4Q6ZUB0 917 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 DENND1CQ8IV53 801 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 WDR75Q8IWA0 830 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 ZNF276Q8N554 614 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 SLC25A43Q8WUT9 341 aaPredicted RBP5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 CGRRF1Q99675 332 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 ACO2Q99798 780 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 ZNF747Q9BV97 191 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 SLC46A2Q9BY10 475 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 TEX101Q9BY14 249 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 LMBRD1Q9NUN5 540 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 GNL3LQ9NVN8 582 aaKnown RBP5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 JKAMPQ9P055 326 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 STXBP5LQ9Y2K9 1186 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 NR2E3Q9Y5X4 410 aa5.84□□□□□ -1.47
SMCHD1-204ENST00000581226 GOLGA6CA6NDK9 693 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 GOLGA6BA6NDN3 693 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 NT5C1B-RDH14C9J2C7 533 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 H3BUI4 141 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 RNASET2O00584 256 aaKnown RBP5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 PARNO95453 639 aaKnown RBP5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 PEX11BO96011 259 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 GNAI3P08754 354 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 FTH1P19P0C7X4 201 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 GOLGA6DP0CG33 693 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 MYBP10242 640 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 TYRP14679 529 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 GCSHP23434 173 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 GNAI1P63096 354 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 NOMO3P69849 1222 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 FAM189BP81408 668 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 TUBA3CQ13748 450 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 NOMO2Q5JPE7 1267 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 TUBA3EQ6PEY2 450 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 DBX2Q6ZNG2 339 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 GGNQ86UU5 652 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 ZFPM1Q8IX07 1006 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 AOPEPQ8N6M6 819 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 OR56A1Q8NGH5 318 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 PPP1R35Q8TAP8 253 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 CDK5RAP3Q96JB5 506 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 FAM167AQ96KS9 214 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 WDCPQ9H6R7 721 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 AKIP1Q9NQ31 210 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms