RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 RAB33AQ14088 237 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 TFDP1Q14186 410 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 EMC2Q15006 297 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 PCBP1Q15365 356 aaKnown RBP eCLIP11.87□□□□□ -0.51
TOP3A-210ENST00000580713 STPG1Q5TH74 334 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 B3GNT9Q6UX72 402 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 SPEM1Q8N4L4 309 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 LLPHQ9BRT6 129 aaKnown RBP11.87□□□□□ -0.51
TOP3A-210ENST00000580713 ZNF334Q9HCZ1 680 aaPredicted RBP11.87□□□□□ -0.51
TOP3A-210ENST00000580713 PPME1Q9Y570 386 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 ZFYVE26Q68DK2 2539 aa11.87□□□□□ -0.51
TOP3A-210ENST00000580713 TULP1O00294 542 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-210ENST00000580713 EML1O00423 815 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 CPLX1O14810 134 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 TM4SF5O14894 197 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 PRPF3O43395 683 aaKnown RBP11.86□□□□□ -0.51
TOP3A-210ENST00000580713 KCNK5O95279 499 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 ARF4P18085 180 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-210ENST00000580713 ELF1P32519 619 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 PTENP60484 403 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 LRRC32Q14392 662 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 GAS6Q14393 721 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 MXD4Q14582 209 aaPredicted RBP11.86□□□□□ -0.51
TOP3A-210ENST00000580713 XKR9Q5GH70 373 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 FAM78AQ5JUQ0 283 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 PSAPL1Q6NUJ1 521 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 SLC27A1Q6PCB7 646 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 CPLX2Q6PUV4 134 aaKnown RBP11.86□□□□□ -0.51
TOP3A-210ENST00000580713 OTUD6AQ7L8S5 288 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 MTRQ99707 1265 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 CORO1BQ9BR76 489 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 RXFP3Q9NSD7 469 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 RBM12Q9NTZ6 932 aaKnown RBP11.86□□□□□ -0.51
TOP3A-210ENST00000580713 VPS54Q9P1Q0 977 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 CDY1Q9Y6F8 540 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 PKD1L2Q7Z442 2459 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 FRYQ5TBA9 3013 aa11.86□□□□□ -0.51
TOP3A-210ENST00000580713 PRRG1O14668 218 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 ZNF197O14709 1029 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 ZNF263O14978 683 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 B4GALT5O43286 388 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 CDKL5O76039 1030 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 THP07101 528 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 P4HBP07237 508 aaKnown RBP11.85□□□□□ -0.51
TOP3A-210ENST00000580713 ZNF806P0C7X5 589 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 PSMC3P17980 439 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 FCARP24071 287 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 GJB2P29033 226 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 KPNA1P52294 538 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-210ENST00000580713 PTGDRQ13258 359 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-210ENST00000580713 RTL10Q7L3V2 364 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 NSUN7Q8NE18 718 aaKnown RBP11.85□□□□□ -0.51
TOP3A-210ENST00000580713 ETNPPLQ8TBG4 499 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 CSGALNACT1Q8TDX6 532 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 TCEAL4Q96EI5 215 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 NOTCH4Q99466 2003 aa11.85□□□□□ -0.51
TOP3A-210ENST00000580713 CYP3A7-CYP3A51PA0A087WV96 503 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 K7ESF4 209 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 JAK2O60674 1132 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 CTDNEP1O95476 244 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 CYP3A7P24462 503 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 YWHABP31946 246 aaKnown RBP11.84□□□□□ -0.51
TOP3A-210ENST00000580713 VIPR2P41587 438 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 HMGN5P82970 282 aaKnown RBP11.84□□□□□ -0.51
TOP3A-210ENST00000580713 MBTD1Q05BQ5 628 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 FOXC1Q12948 553 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 AMHR2Q16671 573 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 TMEM132AQ24JP5 1023 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 VITQ6UXI7 678 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 PDZD4Q76G19 769 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-210ENST00000580713 WDR5BQ86VZ2 330 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 MAP4K3Q8IVH8 894 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 YAF2Q8IY57 180 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 FAM200AQ8TCP9 573 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 DEPDC1BQ8WUY9 529 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 ASB16Q96NS5 453 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 LSM14BQ9BX40 385 aaKnown RBP11.84□□□□□ -0.51
TOP3A-210ENST00000580713 SLC26A6Q9BXS9 759 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 SMOC1Q9H4F8 434 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 TRPV5Q9NQA5 729 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 AVENQ9NQS1 362 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-210ENST00000580713 WRAP73Q9P2S5 460 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-210ENST00000580713 MTRRQ9UBK8 725 aa11.84□□□□□ -0.51
TOP3A-210ENST00000580713 DDX25Q9UHL0 483 aaKnown RBP11.84□□□□□ -0.51
TOP3A-210ENST00000580713 ZMYM2Q9UBW7 1377 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 WDR27A2RRH5 827 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 SOBPA7XYQ1 873 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 NRG2O14511 850 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-210ENST00000580713 MARCH6O60337 910 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 SPINK2P20155 84 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 DDIT3P35638 169 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 NOVA1P51513 510 aaKnown RBP11.83□□□□□ -0.52
TOP3A-210ENST00000580713 ARPP19P56211 112 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 SPIRE1Q08AE8 756 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 CAPSQ13938 189 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 NTRK3Q16288 839 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 CYP4A22Q5TCH4 519 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 RNF43Q68DV7 783 aa11.83□□□□□ -0.52
TOP3A-210ENST00000580713 Q6ZS52 159 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms