RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 NRIP1P48552 1158 aa23.54■■□□□ 1.36
CDC42EP4-203ENST00000578516 PTPN14Q15678 1187 aa23.54■■□□□ 1.36
CDC42EP4-203ENST00000578516 ZCWPW2Q504Y3 356 aa23.54■■□□□ 1.36
CDC42EP4-203ENST00000578516 C12orf56Q8IXR9 622 aa23.54■■□□□ 1.36
CDC42EP4-203ENST00000578516 ELOA2Q8IYF1 753 aaPredicted RBP23.54■■□□□ 1.36
CDC42EP4-203ENST00000578516 FBXL18Q96ME1 805 aa23.54■■□□□ 1.36
CDC42EP4-203ENST00000578516 GZF1Q9H116 711 aaPredicted RBP23.54■■□□□ 1.36
CDC42EP4-203ENST00000578516 UBQLN1Q9UMX0 589 aaKnown RBP23.54■■□□□ 1.36
CDC42EP4-203ENST00000578516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 LDHAP00338 332 aaKnown RBP23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 SOD2P04179 222 aa23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 CTSAP10619 480 aa23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 TFAMQ00059 246 aaKnown RBP23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 MORC3Q14149 939 aa23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 SNRNP35Q16560 246 aaKnown RBP23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 RTP2Q5QGT7 225 aa23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 SPATA1Q5VX52 437 aa23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 PRSS55Q6UWB4 352 aaPredicted RBP23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 XXYLT1Q8NBI6 393 aa23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 VN1R2Q8NFZ6 395 aa23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 OR5B17Q8NGF7 314 aa23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 DMAC2Q9NW81 257 aa23.53■■□□□ 1.36
CDC42EP4-203ENST00000578516 PRUNE2Q8WUY3 3088 aa23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 C2orf71A6NGG8 1288 aa23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 PDXKO00764 312 aa23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 EXOC3O60645 756 aa23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 IL18RAPO95256 599 aa23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 CXCL14O95715 111 aa23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 RPL17P18621 184 aaKnown RBP23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 CYP24A1Q07973 514 aa23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 SMC1AQ14683 1233 aaKnown RBP23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 FAM171A1Q5VUB5 890 aa23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 UROC1Q96N76 676 aa23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 POP1Q99575 1024 aaKnown RBP23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 MTMR12Q9C0I1 747 aa23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 ASB7Q9H672 318 aa23.52■■□□□ 1.36
CDC42EP4-203ENST00000578516 ZNF233A6NK53 670 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 TMEM189-UBE2V1I3L0A0 370 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 GLP2RO95838 553 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 TKTP29401 623 aaKnown RBP23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 LRPAP1P30533 357 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 CEP135Q66GS9 1140 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 KLHL10Q6JEL2 608 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 DCLRE1AQ6PJP8 1040 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 EP400NLQ6ZTU2 488 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 CEP57Q86XR8 500 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 GLYCTKQ8IVS8 523 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 ADSSL1Q8N142 457 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 BEST2Q8NFU1 509 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 CCDC127Q96BQ5 260 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 NUP62CLQ9H1M0 184 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 TRAF3IP3Q9Y228 551 aa23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 SF3B1O75533 1304 aaKnown RBP eCLIP23.51■■□□□ 1.35
CDC42EP4-203ENST00000578516 KIAA0391O15091 583 aaKnown RBP23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 SPTLC1O15269 473 aa23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 URODP06132 367 aa23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 DLATP10515 647 aaKnown RBP23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 GLUD2P49448 558 aa23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 DLX2Q07687 328 aaPredicted RBP23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 C9orf57Q5W0N0 161 aa23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 LLGL2Q6P1M3 1020 aa23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 CD302Q8IX05 232 aa23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 MRPL43Q8N983 215 aaKnown RBP23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 RIN2Q8WYP3 895 aaPredicted RBP23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 TLE6Q9H808 572 aa23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 DPP3Q9NY33 737 aa23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 KIAA1468Q9P260 1216 aa23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 CTNND2Q9UQB3 1225 aa23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 C2CD2Q9Y426 696 aa23.5■■□□□ 1.35
CDC42EP4-203ENST00000578516 PPP1R3GB7ZBB8 358 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 CALUO43852 315 aaPredicted RBP23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 LILRB3O75022 631 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 TBX10O75333 385 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 NR2F2P24468 414 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 MCM4P33991 863 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 SNRPFP62306 86 aaKnown RBP23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 TFF2Q03403 129 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 DUSP6Q16828 381 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 KIAA0319Q5VV43 1072 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 C1orf127Q8N9H9 656 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 GOLGA5Q8TBA6 731 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 FEZF2Q8TBJ5 459 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 DDX27Q96GQ7 796 aaKnown RBP23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 CGNQ9P2M7 1197 aaKnown RBP23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 DERAQ9Y315 318 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 NUB1Q9Y5A7 615 aa23.49■■□□□ 1.35
CDC42EP4-203ENST00000578516 GOLGA6L22H0YM25 854 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 CLASP2O75122 1294 aaKnown RBP23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 AKAP3O75969 853 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 ITGB3P05106 788 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 CNPP09543 421 aaKnown RBP23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 CYP3A5P20815 502 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 POLR2BP30876 1174 aaKnown RBP23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 RPL9P32969 192 aaKnown RBP23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 STX17P56962 302 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 DLG4P78352 724 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 PSMD6Q15008 389 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 ANKRD40Q6AI12 368 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 SLC9A9Q8IVB4 645 aa23.48■■□□□ 1.35
CDC42EP4-203ENST00000578516 CXorf38Q8TB03 319 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms