RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 SNRNP35Q16560 246 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 COBLL1Q53SF7 1204 aa13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 SPATA1Q5VX52 437 aa13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 JADE1Q6IE81 842 aa13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 PDXDC1Q6P996 788 aa13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 SLC9A9Q8IVB4 645 aa13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 RNF168Q8IYW5 571 aaPredicted RBP13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 MRPL43Q8N983 215 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 CACTINQ8WUQ7 758 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 PAAF1Q9BRP4 392 aa13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 KCTD10Q9H3F6 313 aa13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 MRPL17Q9NRX2 175 aaKnown RBP13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 CACNG4Q9UBN1 327 aa13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 TUBGCP4Q9UGJ1 667 aa13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 NUB1Q9Y5A7 615 aa13.78□□□□□ -0.2
CDK5RAP3-203ENST00000577442 C2orf71A6NGG8 1288 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 F8W810 466 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 CXCL14O95715 111 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 EFEMP2O95967 443 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 SRGAP2BP0DMP2 458 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 RPL13P26373 211 aaKnown RBP13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 NRIP1P48552 1158 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 DSG1Q02413 1049 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 SPAG1Q07617 926 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 NFIL3Q16649 462 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 DUSP6Q16828 381 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 CBWD2Q8IUF1 395 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 CUL9Q8IWT3 2517 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 HASPINQ8TF76 798 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 TMEM174Q8WUU8 243 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 RABGGTAQ92696 567 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 TSG101Q99816 390 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 EMILIN2Q9BXX0 1053 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 GPR62Q9BZJ7 368 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 LMBRD1Q9NUN5 540 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 THEGQ9P2T0 379 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 TRAF3IP3Q9Y228 551 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PCDHGC5Q9Y5F6 944 aa13.77□□□□□ -0.21
CDK5RAP3-203ENST00000577442 VWA8A3KMH1 1905 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 ARHGEF37A1IGU5 675 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 HIDE1A8MVS5 230 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 TULP1O00294 542 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PSMA7O14818 248 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 NR3C1P04150 777 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 TMEM191BP0C7N4 346 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 TFAMQ00059 246 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 HYAL1Q12794 435 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 FAM171A1Q5VUB5 890 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 ADGRD2Q7Z7M1 963 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 USP37Q86T82 979 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PPFIBP1Q86W92 1011 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 EFCAB13Q8IY85 973 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 SMYD4Q8IYR2 804 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 EFHBQ8N7U6 833 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 TRIML1Q8N9V2 468 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 ZSWIM2Q8NEG5 633 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 ERCC4Q92889 916 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 HLA-CQ95604 372 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PABPC5Q96DU9 382 aaKnown RBP13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 ANKRD36BP1Q96IX9 119 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 FNBP1Q96RU3 617 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 TTPALQ9BTX7 342 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 NUP62CLQ9H1M0 184 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 CLSTN2Q9H4D0 955 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 CHST7Q9NS84 486 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 DPP3Q9NY33 737 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 MAN1B1Q9UKM7 699 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 MAPK8IP1Q9UQF2 711 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 FRMD4BQ9Y2L6 1034 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 SCN1AP35498 2009 aa13.76□□□□□ -0.21
CDK5RAP3-203ENST00000577442 SYN3O14994 580 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 MBD3O95983 291 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 TNNC2P02585 160 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 ADH1AP07327 375 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 MCM4P33991 863 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 CYP24A1Q07973 514 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 COL19A1Q14993 1142 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PSMD6Q15008 389 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 AAK1Q2M2I8 961 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 EDRF1Q3B7T1 1238 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 RBM23Q86U06 439 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 WDR49Q8IV35 697 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 C3orf58Q8NDZ4 430 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 AUTS2Q8WXX7 1259 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 RIN2Q8WYP3 895 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PIK3R5Q8WYR1 880 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 ZNF560Q96MR9 790 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 IGFLR1Q9H665 355 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 UBE2ZQ9H832 354 aaPredicted RBP13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 PDE11AQ9HCR9 933 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 DMAC2Q9NW81 257 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 CLDND1Q9NY35 253 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 KIAA1468Q9P260 1216 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 ITGA11Q9UKX5 1188 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 R3HCC1Q9Y3T6 440 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 EYSQ5T1H1 3165 aa13.75□□□□□ -0.21
CDK5RAP3-203ENST00000577442 C2CD2LO14523 706 aa13.74□□□□□ -0.21
CDK5RAP3-203ENST00000577442 MAPK13O15264 365 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms