RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 GARTP22102 1010 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 HOXD11P31277 338 aaPredicted RBP8.58□□□□□ -1.04
CCDC40-215ENST00000576033 DLX2Q07687 328 aaPredicted RBP8.58□□□□□ -1.04
CCDC40-215ENST00000576033 CCDC173Q0VFZ6 552 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 HYAL1Q12794 435 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 ALCAMQ13740 583 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 ZBTB6Q15916 424 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 UPP1Q16831 310 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 CCDC142Q17RM4 750 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 DPCR1Q3MIW9 517 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 C1orf220Q5T0J3 134 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 ZNF658Q5TYW1 1059 aaPredicted RBP8.58□□□□□ -1.04
CCDC40-215ENST00000576033 KANK3Q6NY19 840 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 LLGL2Q6P1M3 1020 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 FUT10Q6P4F1 479 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 PRSS55Q6UWB4 352 aaPredicted RBP8.58□□□□□ -1.04
CCDC40-215ENST00000576033 GLYCTKQ8IVS8 523 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 VPS52Q8N1B4 723 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 SLC17A8Q8NDX2 589 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 CCDC127Q96BQ5 260 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 MRPL38Q96DV4 380 aaKnown RBP8.58□□□□□ -1.04
CCDC40-215ENST00000576033 SAMD11Q96NU1 681 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 TMEM175Q9BSA9 504 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 IGFLR1Q9H665 355 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 TMEM206Q9H813 350 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 UBN1Q9NPG3 1134 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 ENTPD7Q9NQZ7 604 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 TLR9Q9NR96 1032 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 FAN1Q9Y2M0 1017 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 PCDHB12Q9Y5F1 795 aa8.58□□□□□ -1.04
CCDC40-215ENST00000576033 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 LRRIQ3A6PVS8 624 aaPredicted RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 LRRN2O75325 713 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 TBX10O75333 385 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 AKAP3O75969 853 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 ITGB3P05106 788 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 TKTP29401 623 aaKnown RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 POLR2BP30876 1174 aaKnown RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 NRIP1P48552 1158 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 ALDH7A1P49419 539 aaKnown RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 TFAMQ00059 246 aaKnown RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 PLCB3Q01970 1234 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 TFF2Q03403 129 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 CYP24A1Q07973 514 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 TMEM132DQ14C87 1099 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 IQCB1Q15051 598 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 PTPN14Q15678 1187 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 CLUL1Q15846 466 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 SNRNP35Q16560 246 aaKnown RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 CEP135Q66GS9 1140 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 ANKRD40Q6AI12 368 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 RSPO2Q6UXX9 243 aaPredicted RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 STXBP4Q6ZWJ1 553 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 RNF168Q8IYW5 571 aaPredicted RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 ADSSL1Q8N142 457 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 GUF1Q8N442 669 aaKnown RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 C1orf127Q8N9H9 656 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 CXorf38Q8TB03 319 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 ZNF516Q92618 1163 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 P2RX5Q93086 422 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 TMEM169Q96HH4 297 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 DUSP9Q99956 384 aaKnown RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 HERC2P3Q9BVR0 1158 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 PLVAPQ9BX97 442 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 MMRN2Q9H8L6 949 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 DMAC2Q9NW81 257 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 KIAA1468Q9P260 1216 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 SIX4Q9UIU6 781 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 ADAM28Q9UKQ2 775 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 STXBP5LQ9Y2K9 1186 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 TIMM13Q9Y5L4 95 aaPredicted RBP8.57□□□□□ -1.04
CCDC40-215ENST00000576033 A0A0C4DFX4 3053 aa8.57□□□□□ -1.04
CCDC40-215ENST00000576033 C2orf71A6NGG8 1288 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 EXOC3O60645 756 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 B3GAT3O94766 335 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 SMC2O95347 1197 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 RB1P06400 928 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 DLATP10515 647 aaKnown RBP8.56□□□□□ -1.04
CCDC40-215ENST00000576033 EPCAMP16422 314 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 NR2F2P24468 414 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 PPM1AP35813 382 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 PSMD2Q13200 908 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 SKIV2LQ15477 1246 aaKnown RBP8.56□□□□□ -1.04
CCDC40-215ENST00000576033 STX1AQ16623 288 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 TIGD5Q53EQ6 642 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 SPATA1Q5VX52 437 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 C9orf57Q5W0N0 161 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 SLFN12LQ6IEE8 588 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 SASS6Q6UVJ0 657 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 C11orf57Q6ZUT1 292 aaPredicted RBP8.56□□□□□ -1.04
CCDC40-215ENST00000576033 HS2ST1Q7LGA3 356 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 APBB1IPQ7Z5R6 666 aaPredicted RBP8.56□□□□□ -1.04
CCDC40-215ENST00000576033 CEP57Q86XR8 500 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 C12orf56Q8IXR9 622 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 XXYLT1Q8NBI6 393 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 RNF214Q8ND24 703 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 NELFBQ8WX92 580 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 DDX27Q96GQ7 796 aaKnown RBP8.56□□□□□ -1.04
CCDC40-215ENST00000576033 FBXL18Q96ME1 805 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 GSDMAQ96QA5 445 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms