RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 FGFR3P22607 806 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 KLRC2P26717 231 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 LRPAP1P30533 357 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 CA8P35219 290 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 ACOT2P49753 483 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 BMT2Q1RMZ1 405 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 TPRNQ4KMQ1 711 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 ZBTB41Q5SVQ8 909 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 FAM171A1Q5VUB5 890 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 CRELD2Q6UXH1 353 aaPredicted RBP14.76□□□□□ -0.05
CIITA-210ENST00000575513 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.76□□□□□ -0.05
CIITA-210ENST00000575513 KRBA2Q6ZNG9 492 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 HDAC7Q8WUI4 952 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 PIK3R5Q8WYR1 880 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 KIF12Q96FN5 646 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 S1PR5Q9H228 398 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 CACNG4Q9UBN1 327 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 BARX2Q9UMQ3 279 aaPredicted RBP14.76□□□□□ -0.05
CIITA-210ENST00000575513 ATG2AQ2TAZ0 1938 aa14.76□□□□□ -0.05
CIITA-210ENST00000575513 DLL1O00548 723 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 SYN3O14994 580 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 TEX28O15482 410 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 MBTPS2O43462 519 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 KLRC4O43908 158 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 EXTL3O43909 919 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 HOXD13P35453 343 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 CLCN4P51793 760 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 ITIH3Q06033 890 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 SPATA1Q5VX52 437 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 ELMSAN1Q6PJG2 1045 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 LNX1Q8TBB1 728 aaPredicted RBP14.75□□□□□ -0.05
CIITA-210ENST00000575513 TMEM174Q8WUU8 243 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 SCFD1Q8WVM8 642 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 RIN2Q8WYP3 895 aaPredicted RBP14.75□□□□□ -0.05
CIITA-210ENST00000575513 HPS3Q969F9 1004 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 C18orf25Q96B23 403 aaPredicted RBP14.75□□□□□ -0.05
CIITA-210ENST00000575513 UHRF1Q96T88 793 aaPredicted RBP14.75□□□□□ -0.05
CIITA-210ENST00000575513 GOLGA2P5Q9HBQ8 144 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 KIAA1586Q9HCI6 787 aa14.75□□□□□ -0.05
CIITA-210ENST00000575513 C2CD2LO14523 706 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 CASP1P29466 404 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 RBM10P98175 930 aaKnown RBP14.74□□□□□ -0.05
CIITA-210ENST00000575513 TMEM132DQ14C87 1099 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 RTP2Q5QGT7 225 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 LLGL2Q6P1M3 1020 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 SYCE2Q6PIF2 218 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 CLEC17AQ6ZS10 378 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 ANKS3Q6ZW76 656 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 GRAMD1CQ8IYS0 662 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 C3orf58Q8NDZ4 430 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 GLIS3Q8NEA6 775 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 BEST2Q8NFU1 509 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 HASPINQ8TF76 798 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 SUSD6Q92537 303 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 CCDC47Q96A33 483 aaKnown RBP14.74□□□□□ -0.05
CIITA-210ENST00000575513 IKZF4Q9H2S9 585 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 ADAM7Q9H2U9 754 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 GOLPH3LQ9H4A5 285 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 EXOC1Q9NV70 894 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 NUB1Q9Y5A7 615 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 BACE2Q9Y5Z0 518 aa14.74□□□□□ -0.05
CIITA-210ENST00000575513 CUL9Q8IWT3 2517 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 TCHHQ07283 1943 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 TGFB1I1O43294 461 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 PAPLNO95428 1278 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 GLUD1P00367 558 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 IL9P15248 144 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 DPYDQ12882 1025 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 KNOP1Q1ED39 458 aaKnown RBP14.73□□□□□ -0.05
CIITA-210ENST00000575513 KMT5BQ4FZB7 885 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 JADE1Q6IE81 842 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 ARMCX5Q6P1M9 558 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 LILRA6Q6PI73 481 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 CYP26C1Q6V0L0 522 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 RTL10Q7L3V2 364 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 HS2ST1Q7LGA3 356 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 CEP57Q86XR8 500 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 BRSK2Q8IWQ3 736 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 C12orf56Q8IXR9 622 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 ELOA2Q8IYF1 753 aaPredicted RBP14.73□□□□□ -0.05
CIITA-210ENST00000575513 FMR1NBQ8N0W7 255 aaPredicted RBP14.73□□□□□ -0.05
CIITA-210ENST00000575513 GPD1LQ8N335 351 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 ENGASEQ8NFI3 743 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 GOLGA5Q8TBA6 731 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 FAM212AQ96EL1 285 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 SUSD3Q96L08 255 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 B3GALT6Q96L58 329 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 FBXL18Q96ME1 805 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 TIGD1Q96MW7 591 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 CBWD1Q9BRT8 395 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 FAM213AQ9BRX8 229 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 RHOBTB2Q9BYZ6 727 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 PLEKHA4Q9H4M7 779 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 SLC39A2Q9NP94 309 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 TUBGCP4Q9UGJ1 667 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 NCOR1O75376 2440 aa14.73□□□□□ -0.05
CIITA-210ENST00000575513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.72□□□□□ -0.05
CIITA-210ENST00000575513 ANO9A1A5B4 782 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 M0QZQ0 153 aa14.72□□□□□ -0.05
CIITA-210ENST00000575513 RHOBTB3O94955 611 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms