RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 RAB33AQ14088 237 aa28.4■■■□□ 2.14
NPLOC4-215ENST00000574095 FOXD4L5Q5VV16 416 aaPredicted RBP28.4■■■□□ 2.14
NPLOC4-215ENST00000574095 SLC39A4Q6P5W5 647 aa28.4■■■□□ 2.14
NPLOC4-215ENST00000574095 SV2BQ7L1I2 683 aa28.4■■■□□ 2.14
NPLOC4-215ENST00000574095 FOXD4L4Q8WXT5 416 aaPredicted RBP28.4■■■□□ 2.14
NPLOC4-215ENST00000574095 DDX12PQ92771 950 aa28.4■■■□□ 2.14
NPLOC4-215ENST00000574095 PLEKHA5Q9HAU0 1116 aa28.4■■■□□ 2.14
NPLOC4-215ENST00000574095 TFIP11Q9UBB9 837 aaKnown RBP28.4■■■□□ 2.14
NPLOC4-215ENST00000574095 NUB1Q9Y5A7 615 aa28.4■■■□□ 2.14
NPLOC4-215ENST00000574095 TTC26A0AVF1 554 aa28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 MYMKA6NI61 221 aa28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 GBP2P32456 591 aaPredicted RBP28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 NASPP49321 788 aaPredicted RBP28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 STK38Q15208 465 aa28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 LIN9Q5TKA1 542 aa28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 ANKS3Q6ZW76 656 aa28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 SFR1Q86XK3 245 aa28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 STAMQ92783 540 aa28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 FAM122AQ96E09 287 aa28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 DOCK6Q96HP0 2047 aa28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 MSTO1Q9BUK6 570 aa28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 BACE2Q9Y5Z0 518 aa28.39■■■□□ 2.14
NPLOC4-215ENST00000574095 A0A087X0B3 334 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 LACTBL1A8MY62 500 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 ANKRD63C9JTQ0 380 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 OGTO15294 1046 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 FAM189A1O60320 539 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 C8AP07357 584 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 PLA2G5P39877 138 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 PPM1LQ5SGD2 360 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 CCDC73Q6ZRK6 1079 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 MAP4K3Q8IVH8 894 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 UBALD2Q8IYN6 164 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 KIF12Q96FN5 646 aa28.38■■■□□ 2.13
NPLOC4-215ENST00000574095 A0A0B4J269 797 aa28.37■■■□□ 2.13
NPLOC4-215ENST00000574095 STAT6P42226 847 aa28.37■■■□□ 2.13
NPLOC4-215ENST00000574095 PPP2R3AQ06190 1150 aa28.37■■■□□ 2.13
NPLOC4-215ENST00000574095 ENOX2Q16206 610 aaKnown RBP28.37■■■□□ 2.13
NPLOC4-215ENST00000574095 KYAT1Q16773 422 aa28.37■■■□□ 2.13
NPLOC4-215ENST00000574095 VARS2Q5ST30 1063 aaKnown RBP28.37■■■□□ 2.13
NPLOC4-215ENST00000574095 LINC00301Q8NCQ3 95 aa28.37■■■□□ 2.13
NPLOC4-215ENST00000574095 DNAJC19Q96DA6 116 aa28.37■■■□□ 2.13
NPLOC4-215ENST00000574095 MYADMQ96S97 322 aa28.37■■■□□ 2.13
NPLOC4-215ENST00000574095 ST6GALNAC4Q9H4F1 302 aa28.37■■■□□ 2.13
NPLOC4-215ENST00000574095 RPF1Q9H9Y2 349 aaKnown RBP28.37■■■□□ 2.13
NPLOC4-215ENST00000574095 TISP43B9A030 160 aa28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 HSP90AA1P07900 732 aaKnown RBP28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 ABCD1P33897 745 aa28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 MCM4P33991 863 aa28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 ZBTB6Q15916 424 aa28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 AXDND1Q5T1B0 1012 aaPredicted RBP28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 ZNF720Q7Z2F6 126 aa28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 FBXL6Q8N531 539 aa28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 SLC7A14Q8TBB6 771 aa28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 FAM212AQ96EL1 285 aa28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 ZNF396Q96N95 335 aaPredicted RBP28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 IKZF4Q9H2S9 585 aa28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 KCNK12Q9HB15 430 aa28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 TBC1D7Q9P0N9 293 aa28.36■■■□□ 2.13
NPLOC4-215ENST00000574095 SYN3O14994 580 aa28.35■■■□□ 2.13
NPLOC4-215ENST00000574095 SPTLC2O15270 562 aa28.35■■■□□ 2.13
NPLOC4-215ENST00000574095 CCL16O15467 120 aa28.35■■■□□ 2.13
NPLOC4-215ENST00000574095 PDGFBP01127 241 aaPredicted RBP28.35■■■□□ 2.13
NPLOC4-215ENST00000574095 GET4Q7L5D6 327 aaPredicted RBP28.35■■■□□ 2.13
NPLOC4-215ENST00000574095 GRASPQ7Z6J2 395 aaPredicted RBP28.35■■■□□ 2.13
NPLOC4-215ENST00000574095 SUGP1Q8IWZ8 645 aaKnown RBP28.35■■■□□ 2.13
NPLOC4-215ENST00000574095 PDILTQ8N807 584 aa28.35■■■□□ 2.13
NPLOC4-215ENST00000574095 UBQLN1Q9UMX0 589 aaKnown RBP28.35■■■□□ 2.13
NPLOC4-215ENST00000574095 ZNF318Q5VUA4 2279 aa28.35■■■□□ 2.13
NPLOC4-215ENST00000574095 DOCK8Q8NF50 2099 aa28.34■■■□□ 2.13
NPLOC4-215ENST00000574095 HNRNPA1P09651 372 aaKnown RBP eCLIP28.34■■■□□ 2.13
NPLOC4-215ENST00000574095 GUCY2FP51841 1108 aa28.34■■■□□ 2.13
NPLOC4-215ENST00000574095 NTHL1P78549 312 aa28.34■■■□□ 2.13
NPLOC4-215ENST00000574095 FOXD4L6Q3SYB3 417 aaPredicted RBP28.34■■■□□ 2.13
NPLOC4-215ENST00000574095 FOXD4L3Q6VB84 417 aaPredicted RBP28.34■■■□□ 2.13
NPLOC4-215ENST00000574095 SPRYD3Q8NCJ5 442 aa28.34■■■□□ 2.13
NPLOC4-215ENST00000574095 SUSD3Q96L08 255 aa28.34■■■□□ 2.13
NPLOC4-215ENST00000574095 MRPL44Q9H9J2 332 aaKnown RBP28.34■■■□□ 2.13
NPLOC4-215ENST00000574095 CPSF3Q9UKF6 684 aaKnown RBP28.34■■■□□ 2.13
NPLOC4-215ENST00000574095 POLIQ9UNA4 740 aa28.34■■■□□ 2.13
NPLOC4-215ENST00000574095 LRPAP1P30533 357 aa28.33■■■□□ 2.13
NPLOC4-215ENST00000574095 ACOT2P49753 483 aa28.33■■■□□ 2.13
NPLOC4-215ENST00000574095 ARPP19P56211 112 aa28.33■■■□□ 2.13
NPLOC4-215ENST00000574095 ROR1Q01973 937 aa28.33■■■□□ 2.13
NPLOC4-215ENST00000574095 TDGQ13569 410 aa28.33■■■□□ 2.13
NPLOC4-215ENST00000574095 MRPL58Q14197 206 aaKnown RBP28.33■■■□□ 2.13
NPLOC4-215ENST00000574095 UVSSAQ2YD98 709 aa28.33■■■□□ 2.13
NPLOC4-215ENST00000574095 ADALQ6DHV7 355 aa28.33■■■□□ 2.13
NPLOC4-215ENST00000574095 TBC1D4O60343 1298 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 PPP6R2O75170 966 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 PPP1R37O75864 691 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 ADRB2P07550 413 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 IDEP14735 1019 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 GAP43P17677 238 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 CYP3A5P20815 502 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 HOXA9P31269 272 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 SLC8B1Q6J4K2 584 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 RSAD2Q8WXG1 361 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 STRA6Q9BX79 667 aa28.32■■■□□ 2.12
NPLOC4-215ENST00000574095 IGSF9Q9P2J2 1179 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms