RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	CHST2	Q9Y4C5	530 aa		4.65	□□□□□ -1.67
CDC27-213	ENST00000571643	IQGAP3	Q86VI3	1631 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	GCC2	Q8IWJ2	1684 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	EFCAB6	Q5THR3	1501 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	TMEM200C	A6NKL6	621 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	GOLGA8A	A7E2F4	631 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	AHRR	A9YTQ3	701 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	AKR1B10	O60218	316 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	ENDOD1	O94919	500 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	IL2RB	P14784	551 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	ZSCAN20	P17040	1043 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	KRT4	P19013	534 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	NR4A1	P22736	598 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	ID4	P47928	161 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	USP14	P54578	494 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	CLRN1	P58418	232 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	NHLH2	Q02577	135 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	ADRM1	Q16186	407 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	MUM1	Q2TAK8	710 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	MUM1L1	Q5H9M0	696 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	FAM47A	Q5JRC9	791 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	RRP12	Q5JTH9	1297 aa	Known RBP	4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	PRAMEF14	Q5SWL7	426 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643		Q6ZPA2	131 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	KRT26	Q7Z3Y9	468 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	SPATS2	Q86XZ4	545 aa	Known RBP	4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	LMBR1	Q8WVP7	490 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	RIN2	Q8WYP3	895 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	UHRF1	Q96T88	793 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	AGAP2	Q99490	1192 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	MLST8	Q9BVC4	326 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	ACE2	Q9BYF1	805 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	TOR3A	Q9H497	397 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	PRDM12	Q9H4Q4	367 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	GREM2	Q9H772	168 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	IFT122	Q9HBG6	1241 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	AKIP1	Q9NQ31	210 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	RBM12	Q9NTZ6	932 aa	Known RBP	4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	MOCS1	Q9NZB8	636 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	MYO3A	Q8NEV4	1616 aa		4.64	□□□□□ -1.67
CDC27-213	ENST00000571643	NOS1	P29475	1434 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	NAIP	Q13075	1403 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	CEP152	O94986	1710 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	ERVK-7	P63135	1459 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	TEX33	O43247	280 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	VIL1	P09327	827 aa	Known RBP	4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	PTPN7	P35236	360 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	MASP1	P48740	699 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	TMPRSS15	P98073	1019 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	CDK17	Q00537	523 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	FSTL1	Q12841	308 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	STAT4	Q14765	748 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	BEAN1	Q3B7T3	259 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	MBNL2	Q5VZF2	373 aa	Known RBP	4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	NOL8	Q76FK4	1167 aa	Known RBP	4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	ARHGEF19	Q8IW93	802 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	DNAJC10	Q8IXB1	793 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	SUPT20H	Q8NEM7	779 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	SSH1	Q8WYL5	1049 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	AHCYL2	Q96HN2	611 aa	Known RBP	4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	QRSL1	Q9H0R6	528 aa	Known RBP	4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	LANCL2	Q9NS86	450 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	EDAR	Q9UNE0	448 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	WASHC2A	Q641Q2	1341 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	NUP155	O75694	1391 aa		4.63	□□□□□ -1.67
CDC27-213	ENST00000571643	UGGT1	Q9NYU2	1555 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	CENPVL1	A0A0U1RR11	272 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	GRID2IP	A4D2P6	1211 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	ANKRD62	A6NC57	917 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	FAM171A2	A8MVW0	826 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	NCR1	O76036	304 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	CNGA1	P29973	690 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	PER3	P56645	1201 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	RNASE9	P60153	205 aa	Known RBP	4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	NANOS3	P60323	173 aa	Known RBP	4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	GUCY1B3	Q02153	619 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	KRTAP15-1	Q3LI76	137 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	HECTD2	Q5U5R9	776 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	RNF219	Q5W0B1	726 aa	Predicted RBP	4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	STRA8	Q7Z7C7	330 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	TRMT2A	Q8IZ69	625 aa	Known RBP	4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	LCORL	Q8N3X6	602 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	UBR7	Q8N806	425 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	TSPEAR	Q8WU66	669 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	CASKIN2	Q8WXE0	1202 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	CEP95	Q96GE4	821 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	COQ10A	Q96MF6	247 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	CRAMP1	Q96RY5	1269 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	ADI1	Q9BV57	179 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	ZNF768	Q9H5H4	540 aa	Known RBP	4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	SCOC	Q9UIL1	159 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	ATP11B	Q9Y2G3	1177 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	FPGT-TNNI3K	V9GXZ4	949 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	STRC	Q7RTU9	1775 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	MED14	O60244	1454 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	SLIT1	O75093	1534 aa		4.62	□□□□□ -1.67
CDC27-213	ENST00000571643	CXorf49	A8MYA2	514 aa	Predicted RBP	4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms