RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 KANK3Q6NY19 840 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 PRSS55Q6UWB4 352 aaPredicted RBP7.59□□□□□ -1.19
SMG6-209ENST00000571442 APBB1IPQ7Z5R6 666 aaPredicted RBP7.59□□□□□ -1.19
SMG6-209ENST00000571442 C12orf56Q8IXR9 622 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 ELOA2Q8IYF1 753 aaPredicted RBP7.59□□□□□ -1.19
SMG6-209ENST00000571442 RDH13Q8NBN7 331 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 OR5B17Q8NGF7 314 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 RSPH1Q8WYR4 309 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 SMARCE1Q969G3 411 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 EEF2KMTQ96G04 330 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 POP1Q99575 1024 aaKnown RBP7.59□□□□□ -1.19
SMG6-209ENST00000571442 IGFLR1Q9H665 355 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 PLEKHA5Q9HAU0 1116 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 PDE11AQ9HCR9 933 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 CHST7Q9NS84 486 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 ADAM28Q9UKQ2 775 aa7.59□□□□□ -1.19
SMG6-209ENST00000571442 ANO9A1A5B4 782 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 PPP1R3GB7ZBB8 358 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 TMEM189-UBE2V1I3L0A0 370 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 TNFRSF10AO00220 468 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 PIRO00625 290 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 C2CD2LO14523 706 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 KINO60870 393 aaKnown RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 CLASP2O75122 1294 aaKnown RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 B3GAT3O94766 335 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 CXCL14O95715 111 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 CNPP09543 421 aaKnown RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 TKTP29401 623 aaKnown RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 LRPAP1P30533 357 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 NRIP1P48552 1158 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 DLG4P78352 724 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 KRT17Q04695 432 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 MORC3Q14149 939 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 TMEM132DQ14C87 1099 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 SKIV2LQ15477 1246 aaKnown RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 DUSP6Q16828 381 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 CTC1Q2NKJ3 1217 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 TIGD5Q53EQ6 642 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 C1orf220Q5T0J3 134 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 ZNF658Q5TYW1 1059 aaPredicted RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 SPATA1Q5VX52 437 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 C9orf57Q5W0N0 161 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 RSPO2Q6UXX9 243 aaPredicted RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 STXBP4Q6ZWJ1 553 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 TMC7Q7Z402 723 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 ADSSL1Q8N142 457 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 GUF1Q8N442 669 aaKnown RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 MRPL43Q8N983 215 aaKnown RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 C1orf127Q8N9H9 656 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 MICAL1Q8TDZ2 1067 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 ATXN2LQ8WWM7 1075 aaKnown RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 ZNF516Q92618 1163 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 ELMO3Q96BJ8 720 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 BORCS6Q96GS4 357 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 KLHL5Q96PQ7 755 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 GSDMAQ96QA5 445 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 MED15Q96RN5 788 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 COLEC11Q9BWP8 271 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 CLSTN2Q9H4D0 955 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 ENTPD7Q9NQZ7 604 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 RBAKQ9NYW8 714 aaPredicted RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 CLEC1BQ9P126 229 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 SIX4Q9UIU6 781 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 CDH22Q9UJ99 828 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 UBQLN1Q9UMX0 589 aaKnown RBP7.58□□□□□ -1.2
SMG6-209ENST00000571442 TRAF3IP3Q9Y228 551 aa7.58□□□□□ -1.2
SMG6-209ENST00000571442 DOCK6Q96HP0 2047 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 H3BQ06 376 aaPredicted RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 TULP1O00294 542 aaPredicted RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 PDXKO00764 312 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 TEX28O15482 410 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 TADA2AO75478 443 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 AKAP3O75969 853 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 LDHAP00338 332 aaKnown RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 NR3C1P04150 777 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 EPCAMP16422 314 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 CYP3A5P20815 502 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 FGFR3P22607 806 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 AARSP49588 968 aaKnown RBP eCLIP7.57□□□□□ -1.2
SMG6-209ENST00000571442 MRPS5P82675 430 aaKnown RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 DSG1Q02413 1049 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 CYP24A1Q07973 514 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 ADAM15Q13444 863 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 SMC1AQ14683 1233 aaKnown RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 SNRNP35Q16560 246 aaKnown RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 KYAT1Q16773 422 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 COBLL1Q53SF7 1204 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 FAM171A1Q5VUB5 890 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 ANKRD40Q6AI12 368 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 CENPPQ6IPU0 288 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 LLGL2Q6P1M3 1020 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 DCLRE1AQ6PJP8 1040 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 SLC9A9Q8IVB4 645 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 GLYCTKQ8IVS8 523 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 XXYLT1Q8NBI6 393 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 LNX1Q8TBB1 728 aaPredicted RBP7.57□□□□□ -1.2
SMG6-209ENST00000571442 ADAMTS19Q8TE59 1207 aa7.57□□□□□ -1.2
SMG6-209ENST00000571442 SLC22A17Q8WUG5 538 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms