RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 MCL1Q07820 350 aa18.63■□□□□ 0.57
RPAIN-208ENST00000571043 GDF6Q6KF10 455 aaPredicted RBP18.63■□□□□ 0.57
RPAIN-208ENST00000571043 CREG2Q8IUH2 290 aa18.63■□□□□ 0.57
RPAIN-208ENST00000571043 BRSK2Q8IWQ3 736 aa18.63■□□□□ 0.57
RPAIN-208ENST00000571043 CAGE1Q8TC20 777 aa18.63■□□□□ 0.57
RPAIN-208ENST00000571043 CALR3Q96L12 384 aaKnown RBP18.63■□□□□ 0.57
RPAIN-208ENST00000571043 PARD6BQ9BYG5 372 aa18.63■□□□□ 0.57
RPAIN-208ENST00000571043 SENP6Q9GZR1 1112 aaPredicted RBP18.63■□□□□ 0.57
RPAIN-208ENST00000571043 PDE11AQ9HCR9 933 aa18.63■□□□□ 0.57
RPAIN-208ENST00000571043 NCANO14594 1321 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 CNTNAP2Q9UHC6 1331 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 MKI67P46013 3256 aaKnown RBP18.62■□□□□ 0.57
RPAIN-208ENST00000571043 SMIM35A0A1B0GVV1 85 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 ANKRD62A6NC57 917 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 TMOD1P28289 359 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 SURF1Q15526 300 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 FAM47CQ5HY64 1035 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 WDR44Q5JSH3 913 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 COL13A1Q5TAT6 717 aaPredicted RBP18.62■□□□□ 0.57
RPAIN-208ENST00000571043 TSHZ1Q6ZSZ6 1077 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 METTL13Q8N6R0 699 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 TPCN2Q8NHX9 752 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 CAPZA3Q96KX2 299 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 C1orf112Q9NSG2 853 aa18.62■□□□□ 0.57
RPAIN-208ENST00000571043 TULP1O00294 542 aaPredicted RBP18.61■□□□□ 0.57
RPAIN-208ENST00000571043 ABLIM1O14639 778 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 ZNF185O15231 689 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 OGTO15294 1046 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 FAM189A1O60320 539 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 HLA-DRAP01903 254 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 PROZP22891 400 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 USP8P40818 1118 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 NOP2P46087 812 aaKnown RBP18.61■□□□□ 0.57
RPAIN-208ENST00000571043 CLCN3P51790 818 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 CLCN6P51797 869 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 WNT7BP56706 349 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 BRD3Q15059 726 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 TCEAL1Q15170 157 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 ZBTB41Q5SVQ8 909 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 TDRD10Q5VZ19 366 aaKnown RBP18.61■□□□□ 0.57
RPAIN-208ENST00000571043 IFNLR1Q8IU57 520 aaPredicted RBP18.61■□□□□ 0.57
RPAIN-208ENST00000571043 RPUSD2Q8IZ73 545 aaKnown RBP18.61■□□□□ 0.57
RPAIN-208ENST00000571043 KIAA0319LQ8IZA0 1049 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 LRRC57Q8N9N7 239 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 EPS8L1Q8TE68 723 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 CTNNBL1Q8WYA6 563 aaPredicted RBP18.61■□□□□ 0.57
RPAIN-208ENST00000571043 RFFLQ8WZ73 363 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 DHX38Q92620 1227 aaKnown RBP18.61■□□□□ 0.57
RPAIN-208ENST00000571043 ISCUQ9H1K1 167 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 ANKZF1Q9H8Y5 726 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 NOCTQ9UK39 431 aaKnown RBP18.61■□□□□ 0.57
RPAIN-208ENST00000571043 RAB21Q9UL25 225 aa18.61■□□□□ 0.57
RPAIN-208ENST00000571043 CES2O00748 559 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 NCK2O43639 380 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 CYP2C9P11712 490 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 GZMAP12544 262 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 FAM187BQ17R55 369 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 C1orf53Q5VUE5 145 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 SMYD5Q6GMV2 418 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 MPZL3Q6UWV2 235 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 SLC39A5Q6ZMH5 540 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 SLFN11Q7Z7L1 901 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 SYCE1Q8N0S2 351 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 DIS3LQ8TF46 1054 aaKnown RBP18.6■□□□□ 0.57
RPAIN-208ENST00000571043 COG1Q8WTW3 980 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 SLC20A1Q8WUM9 679 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 TATDN2Q93075 761 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 NLRP4Q96MN2 994 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 TCHPQ9BT92 498 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 EPC1Q9H2F5 836 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 PTPRHQ9HD43 1115 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 SEPT11Q9NVA2 429 aaKnown RBP18.6■□□□□ 0.57
RPAIN-208ENST00000571043 SIP14410 1827 aa18.6■□□□□ 0.57
RPAIN-208ENST00000571043 TTLL13PA6NNM8 815 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 PDE2AO00408 941 aaPredicted RBP18.59■□□□□ 0.57
RPAIN-208ENST00000571043 CYP26A1O43174 497 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 FTCDO95954 541 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 CHRNB2P17787 502 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 PIK3CAP42336 1068 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 PAFAH1B1P43034 410 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 PHKA2P46019 1235 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 MBTD1Q05BQ5 628 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 BIRC3Q13489 604 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 PTGISQ16647 500 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 TAF2Q6P1X5 1199 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 TMCO3Q6UWJ1 677 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 NOP9Q86U38 636 aaKnown RBP18.59■□□□□ 0.57
RPAIN-208ENST00000571043 SERINC5Q86VE9 423 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 WDR49Q8IV35 697 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 NOA1Q8NC60 698 aaKnown RBP18.59■□□□□ 0.57
RPAIN-208ENST00000571043 PAWRQ96IZ0 340 aaKnown RBP18.59■□□□□ 0.57
RPAIN-208ENST00000571043 PRMT7Q9NVM4 692 aaPredicted RBP18.59■□□□□ 0.57
RPAIN-208ENST00000571043 CPSF3Q9UKF6 684 aaKnown RBP18.59■□□□□ 0.57
RPAIN-208ENST00000571043 TNFSF13BQ9Y275 285 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 CCDC151A5D8V7 595 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 RTN2O75298 545 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 VNN1O95497 513 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 HARSP12081 509 aaKnown RBP18.59■□□□□ 0.57
RPAIN-208ENST00000571043 CYP11B1P15538 503 aa18.59■□□□□ 0.57
RPAIN-208ENST00000571043 EN2P19622 333 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms