RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 COA3Q9Y2R0 106 aaPredicted RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 RABGAP1Q9Y3P9 1069 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 NUB1Q9Y5A7 615 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 SNX13Q9Y5W8 968 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 NUMBLQ9Y6R0 609 aa3.73□□□□□ -1.81
CNOT1-221ENST00000569924 DDX60Q8IY21 1712 aaKnown RBP3.73□□□□□ -1.81
CNOT1-221ENST00000569924 POLR2AP24928 1970 aaKnown RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 ITIH6Q6UXX5 1313 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 FAM95CA0A1B0GW59 222 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 FAM90A27PA6NNH2 459 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 C22orf46C9J442 243 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 PSMD14O00487 310 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 KRIT1O00522 736 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 TERTO14746 1132 aaKnown RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 NCAM2O15394 837 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 ECE2O60344 883 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 BUB1BO60566 1050 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 PPP1R11O60927 126 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 FKTNO75072 461 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 ALX3O95076 343 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 CSTBP04080 98 aaKnown RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 ANXA1P04083 346 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 PYGLP06737 847 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 GLB1P16278 677 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 MAP4P27816 1152 aaKnown RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 SMARCA1P28370 1054 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 TMPOP42166 694 aaKnown RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 MAPK10P53779 464 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 EPHA5P54756 1037 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 FKBP1BP68106 108 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 AIMP1Q12904 312 aaKnown RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 PDE1CQ14123 709 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 THEMIS2Q5TEJ8 643 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 MROH9Q5TGP6 573 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 HLA-DQA1Q5Y7H0 255 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 ICE2Q659A1 982 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 TTLL5Q6EMB2 1281 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 TIGD7Q6NT04 549 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 MZT2BQ6NZ67 158 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 C1orf122Q6ZSJ8 110 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 KCTD1Q719H9 257 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 RIOX2Q8IUF8 465 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 SYTL1Q8IYJ3 562 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 ZNF527Q8NB42 609 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 GIMAP8Q8ND71 665 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 TMEM52Q8NDY8 209 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 PLBD2Q8NHP8 589 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 PLEKHO2Q8TD55 490 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 NSUN6Q8TEA1 469 aaKnown RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 TSPEARQ8WU66 669 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 NRG4Q8WWG1 115 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 RSAD2Q8WXG1 361 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 FATE1Q969F0 183 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 FERMT2Q96AC1 680 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 DCPSQ96C86 337 aaKnown RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 TRIM11Q96F44 468 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 UBXN10Q96LJ8 280 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 PPP1R16BQ96T49 567 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 EYA3Q99504 573 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 COLEC11Q9BWP8 271 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 TTLL2Q9BWV7 592 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 ACE2Q9BYF1 805 aaPredicted RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 CD244Q9BZW8 370 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 KCTD10Q9H3F6 313 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 POFUT1Q9H488 388 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 PRDM12Q9H4Q4 367 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 RASSF1Q9NS23 344 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 CLIC5Q9NZA1 410 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 MARCH2Q9P0N8 246 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 POLLQ9UGP5 575 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 NR2E3Q9Y5X4 410 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 CFAP20Q9Y6A4 193 aaKnown RBP3.72□□□□□ -1.81
CNOT1-221ENST00000569924 TAF1P21675 1872 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 RTL9Q8NET4 1388 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 AKAP11Q9UKA4 1901 aa3.72□□□□□ -1.81
CNOT1-221ENST00000569924 UBA6A0AVT1 1052 aaPredicted RBP3.71□□□□□ -1.82
CNOT1-221ENST00000569924 TMEM82A0PJX8 343 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 ADM5C9JUS6 153 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 H3BM21 787 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 hCG_1984214I3L0E3 225 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 SLC16A6O15403 523 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 FOXP2O15409 715 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 FFAR2O15552 330 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 PHGDHO43175 533 aaKnown RBP3.71□□□□□ -1.82
CNOT1-221ENST00000569924 PRPF6O94906 941 aaKnown RBP3.71□□□□□ -1.82
CNOT1-221ENST00000569924 C4BPAP04003 597 aaKnown RBP3.71□□□□□ -1.82
CNOT1-221ENST00000569924 FUCA1P04066 466 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 THP07101 528 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 DHRS4L1P0CG22 281 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 BMP3P12645 472 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 MAP2K6P52564 334 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 RPS8P62241 208 aaKnown RBP3.71□□□□□ -1.82
CNOT1-221ENST00000569924 RAB1AP62820 205 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 CDK17Q00537 523 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 DSC2Q02487 901 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 MALLQ13021 153 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 G3BP1Q13283 466 aaKnown RBP eCLIP3.71□□□□□ -1.82
CNOT1-221ENST00000569924 TUSC3Q13454 348 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 SPIDRQ14159 915 aa3.71□□□□□ -1.82
CNOT1-221ENST00000569924 TRIM25Q14258 630 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms