RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 GEN1Q17RS7 908 aa6.35□□□□□ -1.39
CHD9-220ENST00000569794 CCDC144BQ3MJ40 725 aa6.35□□□□□ -1.39
CHD9-220ENST00000569794 PQLC1Q8N2U9 271 aa6.35□□□□□ -1.39
CHD9-220ENST00000569794 ZNF366Q8N895 744 aa6.35□□□□□ -1.39
CHD9-220ENST00000569794 APPBP2Q92624 585 aa6.35□□□□□ -1.39
CHD9-220ENST00000569794 ZNF70Q9UC06 446 aaPredicted RBP6.35□□□□□ -1.39
CHD9-220ENST00000569794 SLC23A1Q9UHI7 598 aa6.35□□□□□ -1.39
CHD9-220ENST00000569794 SCOCQ9UIL1 159 aa6.35□□□□□ -1.39
CHD9-220ENST00000569794 hCG_2014768A0A024R1R8 64 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 CKBP12277 381 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 FOLR3P41439 243 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 CCT2P78371 535 aaKnown RBP6.34□□□□□ -1.39
CHD9-220ENST00000569794 MAPK7Q13164 816 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 ADRM1Q16186 407 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 KIAA0895LQ68EN5 471 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 SDE2Q6IQ49 451 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 PTF1AQ7RTS3 328 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 GRASPQ7Z6J2 395 aaPredicted RBP6.34□□□□□ -1.39
CHD9-220ENST00000569794 SARAFQ96BY9 339 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 MARS2Q96GW9 593 aaKnown RBP6.34□□□□□ -1.39
CHD9-220ENST00000569794 LANCL2Q9NS86 450 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 FANCLQ9NW38 375 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 HSFX1Q9UBD0 423 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 ENTPD2Q9Y5L3 495 aa6.34□□□□□ -1.39
CHD9-220ENST00000569794 SBNO2Q9Y2G9 1366 aa6.33□□□□□ -1.4
CHD9-220ENST00000569794 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.33□□□□□ -1.4
CHD9-220ENST00000569794 WDR91A4D1P6 747 aa6.33□□□□□ -1.4
CHD9-220ENST00000569794 GSG1L2A8MUP6 293 aa6.33□□□□□ -1.4
CHD9-220ENST00000569794 WT1P19544 449 aaPredicted RBP6.33□□□□□ -1.4
CHD9-220ENST00000569794 FPR1P21462 350 aa6.33□□□□□ -1.4
CHD9-220ENST00000569794 PER3P56645 1201 aa6.33□□□□□ -1.4
CHD9-220ENST00000569794 IGBP1P78318 339 aa6.33□□□□□ -1.4
CHD9-220ENST00000569794 MRPS9P82933 396 aaKnown RBP6.33□□□□□ -1.4
CHD9-220ENST00000569794 FAM180AQ6UWF9 173 aa6.33□□□□□ -1.4
CHD9-220ENST00000569794 CLRN3Q8NCR9 226 aa6.33□□□□□ -1.4
CHD9-220ENST00000569794 MFSD3Q96ES6 412 aa6.33□□□□□ -1.4
CHD9-220ENST00000569794 SENP6Q9GZR1 1112 aaPredicted RBP6.33□□□□□ -1.4
CHD9-220ENST00000569794 LDAHQ9H6V9 325 aa6.33□□□□□ -1.4
CHD9-220ENST00000569794 SETD1BQ9UPS6 1966 aaKnown RBP6.33□□□□□ -1.4
CHD9-220ENST00000569794 TRGV11A0A075B6L2 103 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 BPIP17213 487 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 PPP3CAQ08209 521 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
CHD9-220ENST00000569794 DALRD3Q5D0E6 543 aaKnown RBP6.32□□□□□ -1.4
CHD9-220ENST00000569794 ZNF425Q6IV72 752 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 SEM1Q6ZVN7 128 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 UBE3BQ7Z3V4 1068 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 LEO1Q8WVC0 666 aaPredicted RBP6.32□□□□□ -1.4
CHD9-220ENST00000569794 CASKIN2Q8WXE0 1202 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 AUTS2Q8WXX7 1259 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 DPF1Q92782 380 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 FATE1Q969F0 183 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 FEZ1Q99689 392 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 MYOCQ99972 504 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 GREM2Q9H772 168 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 CPNE5Q9HCH3 593 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 RBM12Q9NTZ6 932 aaKnown RBP6.32□□□□□ -1.4
CHD9-220ENST00000569794 AJAP1Q9UKB5 411 aaPredicted RBP6.32□□□□□ -1.4
CHD9-220ENST00000569794 PLAAQ9Y263 795 aa6.32□□□□□ -1.4
CHD9-220ENST00000569794 PLEKHD1A6NEE1 506 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 CELA2AP08217 269 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 GPD1P21695 349 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 IBSPP21815 317 aaPredicted RBP6.31□□□□□ -1.4
CHD9-220ENST00000569794 SESN3P58005 492 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 NOMO3P69849 1222 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 NOMO1Q15155 1222 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 MUM1Q2TAK8 710 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 NOMO2Q5JPE7 1267 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 Q8NA96 180 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 HASPINQ8TF76 798 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 NUP133Q8WUM0 1156 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 DDB2Q92466 427 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 MED15Q96RN5 788 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 PNKPQ96T60 521 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 PIF1Q9H611 641 aa6.31□□□□□ -1.4
CHD9-220ENST00000569794 MANSC4A6NHS7 340 aaPredicted RBP6.3□□□□□ -1.4
CHD9-220ENST00000569794 YY2O15391 372 aa6.3□□□□□ -1.4
CHD9-220ENST00000569794 ANAPC15P60006 121 aa6.3□□□□□ -1.4
CHD9-220ENST00000569794 PTPROQ16827 1216 aa6.3□□□□□ -1.4
CHD9-220ENST00000569794 MUM1L1Q5H9M0 696 aa6.3□□□□□ -1.4
CHD9-220ENST00000569794 KIAA1614Q5VZ46 1190 aa6.3□□□□□ -1.4
CHD9-220ENST00000569794 GPATCH3Q96I76 525 aa6.3□□□□□ -1.4
CHD9-220ENST00000569794 IFT122Q9HBG6 1241 aa6.3□□□□□ -1.4
CHD9-220ENST00000569794 METTL14Q9HCE5 456 aaKnown RBP6.3□□□□□ -1.4
CHD9-220ENST00000569794 DMRT3Q9NQL9 472 aa6.3□□□□□ -1.4
CHD9-220ENST00000569794 TMEM140Q9NV12 185 aa6.3□□□□□ -1.4
CHD9-220ENST00000569794 RIPOR2Q9Y4F9 1068 aa6.3□□□□□ -1.4
CHD9-220ENST00000569794 ACTL7AQ9Y615 435 aa6.3□□□□□ -1.4
CHD9-220ENST00000569794 LOC102724159A0A0B4J2E5 919 aa6.29□□□□□ -1.4
CHD9-220ENST00000569794 CCDC151A5D8V7 595 aa6.29□□□□□ -1.4
CHD9-220ENST00000569794 MPPED1O15442 326 aa6.29□□□□□ -1.4
CHD9-220ENST00000569794 TEX33O43247 280 aa6.29□□□□□ -1.4
CHD9-220ENST00000569794 ORC4O43929 436 aa6.29□□□□□ -1.4
CHD9-220ENST00000569794 ALAS1P13196 640 aa6.29□□□□□ -1.4
CHD9-220ENST00000569794 PCSK1P29120 753 aa6.29□□□□□ -1.4
CHD9-220ENST00000569794 MAPK10P53779 464 aa6.29□□□□□ -1.4
CHD9-220ENST00000569794 PWP2Q15269 919 aaKnown RBP6.29□□□□□ -1.4
CHD9-220ENST00000569794 EGFLAMQ63HQ2 1017 aa6.29□□□□□ -1.4
CHD9-220ENST00000569794 VWA1Q6PCB0 445 aa6.29□□□□□ -1.4
CHD9-220ENST00000569794 PEG10Q86TG7 708 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms