RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 GOLGA2P5Q9HBQ8 144 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 DPP3Q9NY33 737 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 DNAJB4Q9UDY4 337 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 MSRAQ9UJ68 235 aa16.99■□□□□ 0.31
SPG7-218ENST00000568205 TRIOBPQ9H2D6 2365 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 LINC01553A4QN01 128 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 STX10O60499 249 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 LAG3P18627 525 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 LRPAP1P30533 357 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 GTF2H1P32780 548 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 GCLMP48507 274 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 SLC11A1P49279 550 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 SMAD3P84022 425 aaKnown RBP16.98■□□□□ 0.31
SPG7-218ENST00000568205 PPP3CAQ08209 521 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 LRIT3Q3SXY7 679 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 TCP11X2Q5H9J9 407 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 SPOUT1Q5T280 376 aaKnown RBP16.98■□□□□ 0.31
SPG7-218ENST00000568205 TRAPPC11Q7Z392 1133 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 TMEM130Q8N3G9 435 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 CLP1Q92989 425 aaKnown RBP16.98■□□□□ 0.31
SPG7-218ENST00000568205 DDX27Q96GQ7 796 aaKnown RBP16.98■□□□□ 0.31
SPG7-218ENST00000568205 CACNG4Q9UBN1 327 aa16.98■□□□□ 0.31
SPG7-218ENST00000568205 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.98■□□□□ 0.31
SPG7-218ENST00000568205 GOLGA6L19H0YKK7 550 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 PODXLO00592 558 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 ARHGEF15O94989 841 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 GALTP07902 379 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 LINC00271P0C7V0 271 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 RPL9P32969 192 aaKnown RBP16.97■□□□□ 0.31
SPG7-218ENST00000568205 OR1G1P47890 313 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 BCAR1P56945 870 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 TPM4P67936 248 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 BIRC3Q13489 604 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 TDRD10Q5VZ19 366 aaKnown RBP16.97■□□□□ 0.31
SPG7-218ENST00000568205 C15orf39Q6ZRI6 1047 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 SV2AQ7L0J3 742 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 C1orf127Q8N9H9 656 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 COLGALT1Q8NBJ5 622 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 RNF214Q8ND24 703 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 ZNF558Q96NG5 402 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 PAAF1Q9BRP4 392 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 NKX2-4Q9H2Z4 354 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 MMRN2Q9H8L6 949 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 TMEM8AQ9HCN3 771 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 AAASQ9NRG9 546 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 ITGA11Q9UKX5 1188 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 PRG3Q9Y2Y8 225 aaPredicted RBP16.97■□□□□ 0.31
SPG7-218ENST00000568205 RALGAPA2Q2PPJ7 1873 aa16.97■□□□□ 0.31
SPG7-218ENST00000568205 ANO9A1A5B4 782 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 CARNS1A5YM72 827 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 AFPP02771 609 aaKnown RBP16.96■□□□□ 0.31
SPG7-218ENST00000568205 C4BPAP04003 597 aaKnown RBP16.96■□□□□ 0.31
SPG7-218ENST00000568205 ALDH2P05091 517 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 ITGB3P05106 788 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 ATP1A3P13637 1013 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 CDK11BP21127 795 aaKnown RBP16.96■□□□□ 0.31
SPG7-218ENST00000568205 PBX3P40426 434 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 ALDH7A1P49419 539 aaKnown RBP16.96■□□□□ 0.31
SPG7-218ENST00000568205 MXI1P50539 228 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 CLCNKBP51801 687 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 KRT31Q15323 416 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 MAN2A1Q16706 1144 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 UPP1Q16831 310 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 ZACNQ401N2 412 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 C9orf57Q5W0N0 161 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 KCNT2Q6UVM3 1135 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 ANKRD20A12PQ8NF67 263 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 CXorf38Q8TB03 319 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 RABGGTAQ92696 567 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 TUBGCP2Q9BSJ2 902 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 SIX4Q9UIU6 781 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 FAN1Q9Y2M0 1017 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 RWDD3Q9Y3V2 267 aa16.96■□□□□ 0.31
SPG7-218ENST00000568205 NRP1O14786 923 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 PPEF2O14830 753 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 PHACTR2O75167 634 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 KRT19P08727 400 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 PRKCSHP14314 528 aaPredicted RBP16.95■□□□□ 0.3
SPG7-218ENST00000568205 DNAJB2P25686 324 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 POLR2BP30876 1174 aaKnown RBP16.95■□□□□ 0.3
SPG7-218ENST00000568205 FMO5P49326 533 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 RBP5P82980 135 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 TAP1Q03518 808 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 KCNH2Q12809 1159 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 KRT39Q6A163 491 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 DCLRE1AQ6PJP8 1040 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 GAS2L3Q86XJ1 694 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 SLC39A11Q8N1S5 342 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 COLEC11Q9BWP8 271 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 TAB2Q9NYJ8 693 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 LIMA1Q9UHB6 759 aaKnown RBP16.95■□□□□ 0.3
SPG7-218ENST00000568205 AGAP1Q9UPQ3 857 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 PCDHB12Q9Y5F1 795 aa16.95■□□□□ 0.3
SPG7-218ENST00000568205 CITO14578 2027 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 NT5C1B-RDH14C9J2C7 533 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 F8W810 466 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 PIRO00625 290 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 N4BP1O75113 896 aaKnown RBP16.94■□□□□ 0.3
SPG7-218ENST00000568205 KIF4AO95239 1232 aa16.94■□□□□ 0.3
SPG7-218ENST00000568205 VNN1O95497 513 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms