RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 RRAGBQ5VZM2 374 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 CCDC149Q6ZUS6 474 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 SFR1Q86XK3 245 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 TMEM130Q8N3G9 435 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 SPIRE2Q8WWL2 714 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 SMG7Q92540 1137 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 C18orf25Q96B23 403 aaPredicted RBP11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 SNX27Q96L92 541 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 PPP1R10Q96QC0 940 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 TTPALQ9BTX7 342 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 PARVGQ9HBI0 331 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 TFIP11Q9UBB9 837 aaKnown RBP11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 ODF2LQ9ULJ1 636 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 POLIQ9UNA4 740 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 NUB1Q9Y5A7 615 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 TSC2P49815 1807 aa11.05□□□□□ -0.64
GTF3C1-206ENST00000566779 SCN1AP35498 2009 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 CCDC195A0A1B0GUA6 201 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 PODXLO00592 558 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 CLDN3O15551 220 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 TOM1L1O75674 476 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 ASGR2P07307 311 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 IGFBP6P24592 240 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 TKTP29401 623 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 GBP2P32456 591 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 MCM4P33991 863 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 NCKAP1LP55160 1127 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 ARPP19P56211 112 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 CREMQ03060 361 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 ELAVL2Q12926 359 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 ZC2HC1CQ53FD0 456 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 LIN9Q5TKA1 542 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 NUDT18Q6ZVK8 323 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 MSTO1Q9BUK6 570 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 SLC38A7Q9NVC3 462 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 TUBGCP4Q9UGJ1 667 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 LIMD1Q9UGP4 676 aa11.04□□□□□ -0.64
GTF3C1-206ENST00000566779 SLC26A4O43511 780 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 TGM5O43548 720 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 GPR37L1O60883 481 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 LILRB3O75022 631 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 PROZP22891 400 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 TNFSF9P41273 254 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 GUCY2FP51841 1108 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 PPP2R3AQ06190 1150 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 NAB2Q15742 525 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 HERC4Q5GLZ8 1057 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 ZBTB41Q5SVQ8 909 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 GET4Q7L5D6 327 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 GPR149Q86SP6 731 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 RNF168Q8IYW5 571 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 KREMEN2Q8NCW0 462 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 C3orf58Q8NDZ4 430 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 ST13P5Q8NFI4 369 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 STAMQ92783 540 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 UROC1Q96N76 676 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 ZNF396Q96N95 335 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 ZMAT2Q96NC0 199 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 CCSER1Q9C0I3 900 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 SMOC2Q9H3U7 446 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 ZSCAN16Q9H4T2 348 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 PTPRHQ9HD43 1115 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 STK17AQ9UEE5 414 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 DPP7Q9UHL4 492 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 KCNG1Q9UIX4 513 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 TBX20Q9UMR3 447 aa11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 SRPRBQ9Y5M8 271 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-206ENST00000566779 TMEM221A6NGB7 291 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 PRR33A8MZF0 331 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 TISP43B9A030 160 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 M0R296 226 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 ABLIM1O14639 778 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 SPTLC2O15270 562 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 ADAM12O43184 909 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 OR1D2P34982 312 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 ZXDAP98168 799 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 SLC39A14Q15043 492 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 PTPN21Q16825 1174 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 ZPBP2Q6X784 338 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 CCDC73Q6ZRK6 1079 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 HFE2Q6ZVN8 426 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 SV2BQ7L1I2 683 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 KCTD17Q8N5Z5 321 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 SLC7A14Q8TBB6 771 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 PIK3R5Q8WYR1 880 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 EDAQ92838 391 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 TATDN2Q93075 761 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 SNX21Q969T3 373 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 ACSF2Q96CM8 615 aaPredicted RBP11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 IKZF4Q9H2S9 585 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 MRPL44Q9H9J2 332 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 RPF1Q9H9Y2 349 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 RXFP1Q9HBX9 757 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 CHST7Q9NS84 486 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 CDY1Q9Y6F8 540 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 ZNF318Q5VUA4 2279 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 CLUHO75153 1309 aa11.02□□□□□ -0.65
GTF3C1-206ENST00000566779 ZDBF2Q9HCK1 2354 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms