RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 TGS1Q96RS0 853 aaKnown RBP8.85□□□□□ -0.99
CDH13-208ENST00000566333 TSPAN18Q96SJ8 248 aa8.85□□□□□ -0.99
CDH13-208ENST00000566333 CGRRF1Q99675 332 aa8.85□□□□□ -0.99
CDH13-208ENST00000566333 TMEM175Q9BSA9 504 aa8.85□□□□□ -0.99
CDH13-208ENST00000566333 HSD3B7Q9H2F3 369 aa8.85□□□□□ -0.99
CDH13-208ENST00000566333 SLC38A7Q9NVC3 462 aa8.85□□□□□ -0.99
CDH13-208ENST00000566333 DACH1Q9UI36 760 aa8.85□□□□□ -0.99
CDH13-208ENST00000566333 SIX4Q9UIU6 781 aa8.85□□□□□ -0.99
CDH13-208ENST00000566333 UBQLN1Q9UMX0 589 aaKnown RBP8.85□□□□□ -0.99
CDH13-208ENST00000566333 FRMD4BQ9Y2L6 1034 aa8.85□□□□□ -0.99
CDH13-208ENST00000566333 PRG3Q9Y2Y8 225 aaPredicted RBP8.85□□□□□ -0.99
CDH13-208ENST00000566333 MTCL1Q9Y4B5 1905 aaKnown RBP8.85□□□□□ -0.99
CDH13-208ENST00000566333 XIRP2A4UGR9 3374 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 ANO9A1A5B4 782 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 TMEM189-UBE2V1I3L0A0 370 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 NRP1O14786 923 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 CETN3O15182 167 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 LPXNO60711 386 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 LETM1O95202 739 aaPredicted RBP8.84□□□□□ -0.99
CDH13-208ENST00000566333 TRIM49P0CI25 452 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 TRIM49CP0CI26 452 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 CCDC192P0DO97 292 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 DLATP10515 647 aaKnown RBP8.84□□□□□ -0.99
CDH13-208ENST00000566333 EPB41P11171 864 aaKnown RBP8.84□□□□□ -0.99
CDH13-208ENST00000566333 CYP3A5P20815 502 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 LRPAP1P30533 357 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 PSMC2P35998 433 aaKnown RBP8.84□□□□□ -0.99
CDH13-208ENST00000566333 BMPR1AP36894 532 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 FXR1P51114 621 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDH13-208ENST00000566333 CLCNKBP51801 687 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 ENPEPQ07075 957 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 PPP3CAQ08209 521 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 HSP90AA2PQ14568 343 aaPredicted RBP8.84□□□□□ -0.99
CDH13-208ENST00000566333 NCAPHQ15003 741 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 UPP1Q16831 310 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 EPC2Q52LR7 807 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 CDKAL1Q5VV42 579 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 TDRD10Q5VZ19 366 aaKnown RBP8.84□□□□□ -0.99
CDH13-208ENST00000566333 C15orf39Q6ZRI6 1047 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 INTS8Q75QN2 995 aaKnown RBP8.84□□□□□ -0.99
CDH13-208ENST00000566333 NT5DC4Q86YG4 428 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 TRIM59Q8IWR1 403 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 TMC2Q8TDI7 906 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 GDPD5Q8WTR4 605 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 ZNF516Q92618 1163 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 SLC35C1Q96A29 364 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 CCDC127Q96BQ5 260 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 ZNF558Q96NG5 402 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 POP1Q99575 1024 aaKnown RBP8.84□□□□□ -0.99
CDH13-208ENST00000566333 CERS4Q9HA82 394 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 SLC28A3Q9HAS3 691 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 INTS13Q9NVM9 706 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 MTUS1Q9ULD2 1270 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 RWDD3Q9Y3V2 267 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 NFE2L3Q9Y4A8 694 aa8.84□□□□□ -0.99
CDH13-208ENST00000566333 PATJQ8NI35 1801 aa8.83□□□□□ -1
CDH13-208ENST00000566333 C5orf42Q9H799 3197 aa8.83□□□□□ -1
CDH13-208ENST00000566333 NT5C1B-RDH14C9J2C7 533 aa8.83□□□□□ -1
CDH13-208ENST00000566333 PODXLO00592 558 aa8.83□□□□□ -1
CDH13-208ENST00000566333 ABCB7O75027 752 aa8.83□□□□□ -1
CDH13-208ENST00000566333 VNN1O95497 513 aa8.83□□□□□ -1
CDH13-208ENST00000566333 ZNF18P17022 549 aa8.83□□□□□ -1
CDH13-208ENST00000566333 DNAJB1P25685 340 aa8.83□□□□□ -1
CDH13-208ENST00000566333 PPM1AP35813 382 aa8.83□□□□□ -1
CDH13-208ENST00000566333 OR1G1P47890 313 aa8.83□□□□□ -1
CDH13-208ENST00000566333 AARSP49588 968 aaKnown RBP eCLIP8.83□□□□□ -1
CDH13-208ENST00000566333 VAMP7P51809 220 aa8.83□□□□□ -1
CDH13-208ENST00000566333 TFAMQ00059 246 aaKnown RBP8.83□□□□□ -1
CDH13-208ENST00000566333 MYL5Q02045 173 aa8.83□□□□□ -1
CDH13-208ENST00000566333 CAMK1Q14012 370 aa8.83□□□□□ -1
CDH13-208ENST00000566333 SURF1Q15526 300 aa8.83□□□□□ -1
CDH13-208ENST00000566333 ZACNQ401N2 412 aa8.83□□□□□ -1
CDH13-208ENST00000566333 C9orf57Q5W0N0 161 aa8.83□□□□□ -1
CDH13-208ENST00000566333 FRMD5Q7Z6J6 570 aa8.83□□□□□ -1
CDH13-208ENST00000566333 FILIP1Q7Z7B0 1213 aa8.83□□□□□ -1
CDH13-208ENST00000566333 DHX40Q8IX18 779 aaKnown RBP8.83□□□□□ -1
CDH13-208ENST00000566333 AOPEPQ8N6M6 819 aa8.83□□□□□ -1
CDH13-208ENST00000566333 KLHL23Q8NBE8 558 aa8.83□□□□□ -1
CDH13-208ENST00000566333 FBXO22Q8NEZ5 403 aa8.83□□□□□ -1
CDH13-208ENST00000566333 BEST2Q8NFU1 509 aa8.83□□□□□ -1
CDH13-208ENST00000566333 ENOX1Q8TC92 643 aaKnown RBP8.83□□□□□ -1
CDH13-208ENST00000566333 HASPINQ8TF76 798 aa8.83□□□□□ -1
CDH13-208ENST00000566333 ARNTL2Q8WYA1 636 aa8.83□□□□□ -1
CDH13-208ENST00000566333 IGSF21Q96ID5 467 aa8.83□□□□□ -1
CDH13-208ENST00000566333 CNOT6LQ96LI5 555 aaKnown RBP8.83□□□□□ -1
CDH13-208ENST00000566333 UROC1Q96N76 676 aa8.83□□□□□ -1
CDH13-208ENST00000566333 SAMD11Q96NU1 681 aa8.83□□□□□ -1
CDH13-208ENST00000566333 BPIFA3Q9BQP9 254 aa8.83□□□□□ -1
CDH13-208ENST00000566333 PLVAPQ9BX97 442 aa8.83□□□□□ -1
CDH13-208ENST00000566333 SRRTQ9BXP5 876 aaKnown RBP8.83□□□□□ -1
CDH13-208ENST00000566333 THAP9Q9H5L6 903 aa8.83□□□□□ -1
CDH13-208ENST00000566333 ZNF576Q9H609 170 aa8.83□□□□□ -1
CDH13-208ENST00000566333 SAMSN1Q9NSI8 373 aaKnown RBP8.83□□□□□ -1
CDH13-208ENST00000566333 DPP3Q9NY33 737 aa8.83□□□□□ -1
CDH13-208ENST00000566333 ADAM28Q9UKQ2 775 aa8.83□□□□□ -1
CDH13-208ENST00000566333 ITGA11Q9UKX5 1188 aa8.83□□□□□ -1
CDH13-208ENST00000566333 C2orf16Q68DN1 1984 aa8.82□□□□□ -1
CDH13-208ENST00000566333 SPTBN5Q9NRC6 3674 aaKnown RBP8.82□□□□□ -1
CDH13-208ENST00000566333 H3BNC9 293 aa8.82□□□□□ -1
CDH13-208ENST00000566333 PIRO00625 290 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms