RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 LCHNA4D1U4 455 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 SMTNL1A8MU46 457 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 B4GALT3O60512 393 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 C4BPAP04003 597 aaKnown RBP13.65□□□□□ -0.22
SF3B3-206ENST00000565990 ALDH2P05091 517 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 GALTP07902 379 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 NFICP08651 508 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 EPB41P11171 864 aaKnown RBP13.65□□□□□ -0.22
SF3B3-206ENST00000565990 MYOGP15173 224 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 IBSPP21815 317 aaPredicted RBP13.65□□□□□ -0.22
SF3B3-206ENST00000565990 RPL9P32969 192 aaKnown RBP13.65□□□□□ -0.22
SF3B3-206ENST00000565990 PBX2P40425 430 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 VAMP7P51809 220 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 AP3M2P53677 418 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 TPM4P67936 248 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 DLG4P78352 724 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 MYL5Q02045 173 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 SOX4Q06945 474 aaPredicted RBP13.65□□□□□ -0.22
SF3B3-206ENST00000565990 SPAG1Q07617 926 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 TMEM132DQ14C87 1099 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 RAB30Q15771 203 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 DUOXA2Q1HG44 320 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 JADE1Q6IE81 842 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 C15orf39Q6ZRI6 1047 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 USP37Q86T82 979 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 LUZP1Q86V48 1076 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 TRIM59Q8IWR1 403 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 LRRC43Q8N309 656 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 C18orf25Q96B23 403 aaPredicted RBP13.65□□□□□ -0.22
SF3B3-206ENST00000565990 CCDC127Q96BQ5 260 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 FAM212AQ96EL1 285 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 KIF12Q96FN5 646 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 RPS6KC1Q96S38 1066 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 CGRRF1Q99675 332 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 KCNF1Q9H3M0 494 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 SAMSN1Q9NSI8 373 aaKnown RBP13.65□□□□□ -0.22
SF3B3-206ENST00000565990 FANCLQ9NW38 375 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 ARMCX3Q9UH62 379 aaPredicted RBP13.65□□□□□ -0.22
SF3B3-206ENST00000565990 INPP5FQ9Y2H2 1132 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 YBX2Q9Y2T7 364 aaKnown RBP13.65□□□□□ -0.22
SF3B3-206ENST00000565990 NFE2L3Q9Y4A8 694 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 PAXBP1Q9Y5B6 917 aa13.65□□□□□ -0.22
SF3B3-206ENST00000565990 MRPL42Q9Y6G3 142 aaKnown RBP13.65□□□□□ -0.22
SF3B3-206ENST00000565990 PTPRJQ12913 1337 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 ANO9A1A5B4 782 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 CARNS1A5YM72 827 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 PIRO00625 290 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 PMM2O15305 246 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 XPOTO43592 962 aaKnown RBP13.64□□□□□ -0.23
SF3B3-206ENST00000565990 EFEMP2O95967 443 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 KRT13P13646 458 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 ZNF18P17022 549 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 GTF2H1P32780 548 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 UPP1Q16831 310 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 GLRA4Q5JXX5 417 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 CD300LGQ6UXG3 332 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 OR5B17Q8NGF7 314 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 SLC35C1Q96A29 364 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 DDX27Q96GQ7 796 aaKnown RBP13.64□□□□□ -0.23
SF3B3-206ENST00000565990 UROC1Q96N76 676 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 FAM193BQ96PV7 902 aaPredicted RBP13.64□□□□□ -0.23
SF3B3-206ENST00000565990 FNBP1Q96RU3 617 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 DNAJB4Q9UDY4 337 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 MSRAQ9UJ68 235 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 SCN1AP35498 2009 aa13.64□□□□□ -0.23
SF3B3-206ENST00000565990 LINC01553A4QN01 128 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 LRRIQ3A6PVS8 624 aaPredicted RBP13.63□□□□□ -0.23
SF3B3-206ENST00000565990 BECN2A8MW95 431 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 C5orf67F2Z3F1 127 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 TNNI1P19237 187 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 EEF1GP26641 437 aaKnown RBP13.63□□□□□ -0.23
SF3B3-206ENST00000565990 BMPR1AP36894 532 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 BCAR1P56945 870 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 PLCB2Q00722 1185 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 TAP1Q03518 808 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 RNASELQ05823 741 aaKnown RBP13.63□□□□□ -0.23
SF3B3-206ENST00000565990 TPD52L1Q16890 204 aaPredicted RBP13.63□□□□□ -0.23
SF3B3-206ENST00000565990 PAN2Q504Q3 1202 aaKnown RBP13.63□□□□□ -0.23
SF3B3-206ENST00000565990 TCP11X2Q5H9J9 407 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 SCARA3Q6AZY7 606 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 DCLRE1AQ6PJP8 1040 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 FAM114A1Q8IWE2 563 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 PLVAPQ9BX97 442 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 DPP3Q9NY33 737 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 HCSTQ9UBK5 93 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 TUBGCP4Q9UGJ1 667 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 SIX4Q9UIU6 781 aa13.63□□□□□ -0.23
SF3B3-206ENST00000565990 TMEM189-UBE2V1I3L0A0 370 aa13.62□□□□□ -0.23
SF3B3-206ENST00000565990 NRP1O14786 923 aa13.62□□□□□ -0.23
SF3B3-206ENST00000565990 NRDCO43847 1150 aa13.62□□□□□ -0.23
SF3B3-206ENST00000565990 STX10O60499 249 aa13.62□□□□□ -0.23
SF3B3-206ENST00000565990 ARHGEF15O94989 841 aa13.62□□□□□ -0.23
SF3B3-206ENST00000565990 CST3P01034 146 aaPredicted RBP13.62□□□□□ -0.23
SF3B3-206ENST00000565990 RB1P06400 928 aa13.62□□□□□ -0.23
SF3B3-206ENST00000565990 CA3P07451 260 aa13.62□□□□□ -0.23
SF3B3-206ENST00000565990 DLATP10515 647 aaKnown RBP13.62□□□□□ -0.23
SF3B3-206ENST00000565990 LAG3P18627 525 aa13.62□□□□□ -0.23
SF3B3-206ENST00000565990 PAX3P23760 479 aa13.62□□□□□ -0.23
SF3B3-206ENST00000565990 ALDH7A1P49419 539 aaKnown RBP13.62□□□□□ -0.23
SF3B3-206ENST00000565990 CLCNKBP51801 687 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms