RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 CDH7Q9ULB5 785 aa20.71■□□□□ 0.91
SPSB3-207ENST00000565550 RBM19Q9Y4C8 960 aaKnown RBP20.71■□□□□ 0.91
SPSB3-207ENST00000565550 CDY1Q9Y6F8 540 aa20.71■□□□□ 0.91
SPSB3-207ENST00000565550 DOCK8Q8NF50 2099 aa20.71■□□□□ 0.91
SPSB3-207ENST00000565550 ZFHX2Q9C0A1 2572 aaPredicted RBP20.71■□□□□ 0.91
SPSB3-207ENST00000565550 TRAPPC3O43617 180 aa20.7■□□□□ 0.9
SPSB3-207ENST00000565550 XYLBO75191 536 aa20.7■□□□□ 0.9
SPSB3-207ENST00000565550 RFX1P22670 979 aa20.7■□□□□ 0.9
SPSB3-207ENST00000565550 SOX4Q06945 474 aaPredicted RBP20.7■□□□□ 0.9
SPSB3-207ENST00000565550 ANGPT1Q15389 498 aa20.7■□□□□ 0.9
SPSB3-207ENST00000565550 UVSSAQ2YD98 709 aa20.7■□□□□ 0.9
SPSB3-207ENST00000565550 PARM1Q6UWI2 310 aa20.7■□□□□ 0.9
SPSB3-207ENST00000565550 FGF14Q92915 247 aa20.7■□□□□ 0.9
SPSB3-207ENST00000565550 AK8Q96MA6 479 aa20.7■□□□□ 0.9
SPSB3-207ENST00000565550 TBC1D17Q9HA65 648 aa20.7■□□□□ 0.9
SPSB3-207ENST00000565550 BACE2Q9Y5Z0 518 aa20.7■□□□□ 0.9
SPSB3-207ENST00000565550 PRR23AA6NEV1 266 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 SPTLC2O15270 562 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 SLC16A4O15374 487 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 PLCG1P19174 1290 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 UBA7P41226 1012 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 RAD51AP2Q09MP3 1159 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 ANKS3Q6ZW76 656 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 ITFG1Q8TB96 612 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 FGF13Q92913 245 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 DDX27Q96GQ7 796 aaKnown RBP20.69■□□□□ 0.9
SPSB3-207ENST00000565550 CDK5RAP3Q96JB5 506 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 ZMAT2Q96NC0 199 aaKnown RBP20.69■□□□□ 0.9
SPSB3-207ENST00000565550 ACAP3Q96P50 834 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 C17orf75Q9HAS0 396 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 SLC2A4RGQ9NR83 387 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 BLOC1S4Q9NUP1 217 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 HCFC1R1Q9NWW0 138 aa20.69■□□□□ 0.9
SPSB3-207ENST00000565550 DOCK6Q96HP0 2047 aa20.68■□□□□ 0.9
SPSB3-207ENST00000565550 A0A087X0B3 334 aa20.68■□□□□ 0.9
SPSB3-207ENST00000565550 NPHP3-ACAD11A0A0J9YXS1 232 aa20.68■□□□□ 0.9
SPSB3-207ENST00000565550 ABLIM1O14639 778 aa20.68■□□□□ 0.9
SPSB3-207ENST00000565550 MCF2P10911 925 aa20.68■□□□□ 0.9
SPSB3-207ENST00000565550 PROZP22891 400 aa20.68■□□□□ 0.9
SPSB3-207ENST00000565550 GPC5P78333 572 aa20.68■□□□□ 0.9
SPSB3-207ENST00000565550 CACNB1Q02641 598 aaPredicted RBP20.68■□□□□ 0.9
SPSB3-207ENST00000565550 DHX8Q14562 1220 aaKnown RBP20.68■□□□□ 0.9
SPSB3-207ENST00000565550 KRI1Q8N9T8 703 aaKnown RBP20.68■□□□□ 0.9
SPSB3-207ENST00000565550 ZBTB45Q96K62 511 aaPredicted RBP20.68■□□□□ 0.9
SPSB3-207ENST00000565550 SNX27Q96L92 541 aa20.68■□□□□ 0.9
SPSB3-207ENST00000565550 NTPCRQ9BSD7 190 aaKnown RBP20.68■□□□□ 0.9
SPSB3-207ENST00000565550 ARHGEF3Q9NR81 526 aa20.68■□□□□ 0.9
SPSB3-207ENST00000565550 SLC38A7Q9NVC3 462 aa20.68■□□□□ 0.9
SPSB3-207ENST00000565550 DNMT3BQ9UBC3 853 aaKnown RBP20.68■□□□□ 0.9
SPSB3-207ENST00000565550 VWA8A3KMH1 1905 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 PODXLO00592 558 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 POU2F2P09086 479 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 HARSP12081 509 aaKnown RBP20.67■□□□□ 0.9
SPSB3-207ENST00000565550 KCNE1P15382 129 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 GUCY2CP25092 1073 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 DDIT3P35638 169 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 SLC12A3P55017 1021 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 MCM6Q14566 821 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 PHLDB3Q6NSJ2 640 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 MPZL3Q6UWV2 235 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 RASSF8Q8NHQ8 419 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 NKD2Q969F2 451 aaPredicted RBP20.67■□□□□ 0.9
SPSB3-207ENST00000565550 CALML4Q96GE6 196 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 TIPINQ9BVW5 301 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 PANK2Q9BZ23 570 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 CCSER1Q9C0I3 900 aa20.67■□□□□ 0.9
SPSB3-207ENST00000565550 PTPRZ1P23471 2315 aaPredicted RBP20.66■□□□□ 0.9
SPSB3-207ENST00000565550 MEFVO15553 781 aaPredicted RBP20.66■□□□□ 0.9
SPSB3-207ENST00000565550 YEATS4O95619 227 aa20.66■□□□□ 0.9
SPSB3-207ENST00000565550 DCNP07585 359 aaKnown RBP20.66■□□□□ 0.9
SPSB3-207ENST00000565550 PLA2G4BP0C869 781 aa20.66■□□□□ 0.9
SPSB3-207ENST00000565550 PDIA4P13667 645 aaKnown RBP20.66■□□□□ 0.9
SPSB3-207ENST00000565550 PABPC1LQ4VXU2 614 aaKnown RBP20.66■□□□□ 0.9
SPSB3-207ENST00000565550 RTL10Q7L3V2 364 aa20.66■□□□□ 0.9
SPSB3-207ENST00000565550 SYT2Q8N9I0 419 aaPredicted RBP20.66■□□□□ 0.9
SPSB3-207ENST00000565550 SPIRE2Q8WWL2 714 aa20.66■□□□□ 0.9
SPSB3-207ENST00000565550 C18orf25Q96B23 403 aaPredicted RBP20.66■□□□□ 0.9
SPSB3-207ENST00000565550 CNTN3Q9P232 1028 aa20.66■□□□□ 0.9
SPSB3-207ENST00000565550 SIT1Q9Y3P8 196 aa20.66■□□□□ 0.9
SPSB3-207ENST00000565550 MORC2Q9Y6X9 1032 aaPredicted RBP20.66■□□□□ 0.9
SPSB3-207ENST00000565550 PPP6R2O75170 966 aa20.65■□□□□ 0.9
SPSB3-207ENST00000565550 PLS3P13797 630 aa20.65■□□□□ 0.9
SPSB3-207ENST00000565550 ROR1Q01973 937 aa20.65■□□□□ 0.9
SPSB3-207ENST00000565550 STRN3Q13033 797 aa20.65■□□□□ 0.9
SPSB3-207ENST00000565550 SEZ6Q53EL9 994 aa20.65■□□□□ 0.9
SPSB3-207ENST00000565550 VARS2Q5ST30 1063 aaKnown RBP20.65■□□□□ 0.9
SPSB3-207ENST00000565550 SLC8B1Q6J4K2 584 aa20.65■□□□□ 0.9
SPSB3-207ENST00000565550 MTSS1LQ765P7 747 aa20.65■□□□□ 0.9
SPSB3-207ENST00000565550 TMEM161BQ8NDZ6 487 aa20.65■□□□□ 0.9
SPSB3-207ENST00000565550 ZNF461Q8TAF7 563 aa20.65■□□□□ 0.9
SPSB3-207ENST00000565550 KCNH3Q9ULD8 1083 aa20.65■□□□□ 0.9
SPSB3-207ENST00000565550 MYO15AQ9UKN7 3530 aa20.64■□□□□ 0.9
SPSB3-207ENST00000565550 TOM1L1O75674 476 aa20.64■□□□□ 0.89
SPSB3-207ENST00000565550 RPL9P32969 192 aaKnown RBP20.64■□□□□ 0.89
SPSB3-207ENST00000565550 SMTNP53814 917 aa20.64■□□□□ 0.89
SPSB3-207ENST00000565550 ARPP19P56211 112 aa20.64■□□□□ 0.89
SPSB3-207ENST00000565550 SLC10A6Q3KNW5 377 aa20.64■□□□□ 0.89
SPSB3-207ENST00000565550 ARSHQ5FYA8 562 aa20.64■□□□□ 0.89
SPSB3-207ENST00000565550 SHC4Q6S5L8 630 aa20.64■□□□□ 0.89
SPSB3-207ENST00000565550 NPAS3Q8IXF0 933 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms