RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 MYCT1Q8N699 235 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 TMEM105Q8N8V8 129 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 CALML4Q96GE6 196 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 INTS4Q96HW7 963 aaKnown RBP16.07■□□□□ 0.16
USB1-210ENST00000565151 RPP25Q9BUL9 199 aaKnown RBP16.07■□□□□ 0.16
USB1-210ENST00000565151 TOPORSQ9NS56 1045 aaPredicted RBP16.07■□□□□ 0.16
USB1-210ENST00000565151 HCFC1R1Q9NWW0 138 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 LARSQ9P2J5 1176 aaKnown RBP16.07■□□□□ 0.16
USB1-210ENST00000565151 EPS15L1Q9UBC2 864 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 SRPRBQ9Y5M8 271 aaKnown RBP16.07■□□□□ 0.16
USB1-210ENST00000565151 BACE2Q9Y5Z0 518 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 CDY1Q9Y6F8 540 aa16.07■□□□□ 0.16
USB1-210ENST00000565151 MYMKA6NI61 221 aa16.06■□□□□ 0.16
USB1-210ENST00000565151 CCL16O15467 120 aa16.06■□□□□ 0.16
USB1-210ENST00000565151 CLDN3O15551 220 aa16.06■□□□□ 0.16
USB1-210ENST00000565151 BMP15O95972 392 aa16.06■□□□□ 0.16
USB1-210ENST00000565151 C8AP07357 584 aa16.06■□□□□ 0.16
USB1-210ENST00000565151 DDIT3P35638 169 aa16.06■□□□□ 0.16
USB1-210ENST00000565151 CREMQ03060 361 aa16.06■□□□□ 0.16
USB1-210ENST00000565151 ELAVL2Q12926 359 aaKnown RBP16.06■□□□□ 0.16
USB1-210ENST00000565151 VARS2Q5ST30 1063 aaKnown RBP16.06■□□□□ 0.16
USB1-210ENST00000565151 AXDND1Q5T1B0 1012 aaPredicted RBP16.06■□□□□ 0.16
USB1-210ENST00000565151 APBB1IPQ7Z5R6 666 aaPredicted RBP16.06■□□□□ 0.16
USB1-210ENST00000565151 LARP4BQ92615 738 aaKnown RBP16.06■□□□□ 0.16
USB1-210ENST00000565151 ACSF2Q96CM8 615 aaPredicted RBP16.06■□□□□ 0.16
USB1-210ENST00000565151 DNAJC19Q96DA6 116 aa16.06■□□□□ 0.16
USB1-210ENST00000565151 PARVGQ9HBI0 331 aa16.06■□□□□ 0.16
USB1-210ENST00000565151 CACNA1HO95180 2353 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 A0A0B4J269 797 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 WDR27A2RRH5 827 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 LACTBL1A8MY62 500 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 K7ELQ4 463 aaPredicted RBP16.05■□□□□ 0.16
USB1-210ENST00000565151 K7ENM7 598 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 PPEF2O14830 753 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 TRAK2O60296 914 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 FAM13AO94988 1023 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 ADRB2P07550 413 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 PDCP20941 246 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 GBP2P32456 591 aaPredicted RBP16.05■□□□□ 0.16
USB1-210ENST00000565151 GTF2BQ00403 316 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 ROR1Q01973 937 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 TDGQ13569 410 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 CWF19L1Q69YN2 538 aaKnown RBP16.05■□□□□ 0.16
USB1-210ENST00000565151 DYMQ7RTS9 669 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 ITFG1Q8TB96 612 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 SLC7A14Q8TBB6 771 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 STRA6Q9BX79 667 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 FGFBP2Q9BYJ0 223 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 KCNH6Q9H252 994 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 PIDD1Q9HB75 910 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 DAXXQ9UER7 740 aaPredicted RBP16.05■□□□□ 0.16
USB1-210ENST00000565151 DUSP12Q9UNI6 340 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 MIA3Q5JRA6 1907 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 DENND4CQ5VZ89 1909 aa16.05■□□□□ 0.16
USB1-210ENST00000565151 ANHXE9PGG2 379 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 PPP1R37O75864 691 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 ABLIM3O94929 683 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 SEC24AO95486 1093 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 VNN2O95498 520 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 CLTAP09496 248 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 LAMP2P13473 410 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 RPL9P32969 192 aaKnown RBP16.04■□□□□ 0.16
USB1-210ENST00000565151 KCNA1Q09470 495 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 HTR4Q13639 388 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 SCARA3Q6AZY7 606 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 SLC8B1Q6J4K2 584 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 GET4Q7L5D6 327 aaPredicted RBP16.04■□□□□ 0.16
USB1-210ENST00000565151 SUGP1Q8IWZ8 645 aaKnown RBP16.04■□□□□ 0.16
USB1-210ENST00000565151 SLC44A3Q8N4M1 653 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 ZSWIM2Q8NEG5 633 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 SUSD3Q96L08 255 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 PANK2Q9BZ23 570 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 SLC38A7Q9NVC3 462 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 DNMT3BQ9UBC3 853 aaKnown RBP16.04■□□□□ 0.16
USB1-210ENST00000565151 DPP7Q9UHL4 492 aa16.04■□□□□ 0.16
USB1-210ENST00000565151 KRBA1A5PL33 1030 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 OGTO15294 1046 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 PI15O43692 258 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 STX6O43752 255 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 HNRNPA1P09651 372 aaKnown RBP eCLIP16.03■□□□□ 0.16
USB1-210ENST00000565151 LRPAP1P30533 357 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 LIG4P49917 911 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 CASP5P51878 434 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 WNT7BP56706 349 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 SLC39A14Q15043 492 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 SLC5A9Q2M3M2 681 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 PPM1LQ5SGD2 360 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 CRELD2Q6UXH1 353 aaPredicted RBP16.03■□□□□ 0.16
USB1-210ENST00000565151 ANKS3Q6ZW76 656 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 ALYREFQ86V81 257 aaKnown RBP16.03■□□□□ 0.16
USB1-210ENST00000565151 SFR1Q86XK3 245 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 MAP4K3Q8IVH8 894 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 DDX12PQ92771 950 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 ZHX3Q9H4I2 956 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 PLEKHA5Q9HAU0 1116 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 KCNG1Q9UIX4 513 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 FBXL5Q9UKA1 691 aa16.03■□□□□ 0.16
USB1-210ENST00000565151 CPSF3Q9UKF6 684 aaKnown RBP16.03■□□□□ 0.16
USB1-210ENST00000565151 MORC2Q9Y6X9 1032 aaPredicted RBP16.03■□□□□ 0.16
USB1-210ENST00000565151 PIEZO1Q92508 2521 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms