RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 HAS1Q92839 578 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 LRGUKQ96M69 825 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 KLHL11Q9NVR0 708 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 FAM30AQ9NZY2 134 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 CALCOCO1Q9P1Z2 691 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 PCDHA3Q9Y5H8 950 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 AATKQ6ZMQ8 1374 aa5.49□□□□□ -1.53
PALB2-203ENST00000565038 E2F8A0AVK6 867 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 MTHFD1P11586 935 aaKnown RBP5.48□□□□□ -1.53
PALB2-203ENST00000565038 CKBP12277 381 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 LAG3P18627 525 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 VCAM1P19320 739 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 MAKP20794 623 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 AKAP5P24588 427 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 MCM7P33993 719 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 PTGS2P35354 604 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 GDF5P43026 501 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 ABHD18Q0P651 414 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 ZNF267Q14586 743 aaPredicted RBP5.48□□□□□ -1.53
PALB2-203ENST00000565038 FLYWCH1Q4VC44 716 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 PABPC1LQ4VXU2 614 aaKnown RBP5.48□□□□□ -1.53
PALB2-203ENST00000565038 TIGD2Q4W5G0 525 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 IFIT1BQ5T764 474 aaKnown RBP5.48□□□□□ -1.53
PALB2-203ENST00000565038 MRGPREQ86SM8 312 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 GRAMD1CQ8IYS0 662 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 FITM2Q8N6M3 262 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 SLC16A11Q8NCK7 471 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 C3orf20Q8ND61 904 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 NEU4Q8WWR8 484 aaPredicted RBP5.48□□□□□ -1.53
PALB2-203ENST00000565038 MARS2Q96GW9 593 aaKnown RBP5.48□□□□□ -1.53
PALB2-203ENST00000565038 MLST8Q9BVC4 326 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 REXO4Q9GZR2 422 aaKnown RBP5.48□□□□□ -1.53
PALB2-203ENST00000565038 CDH19Q9H159 772 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 TMPRSS5Q9H3S3 457 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 USP25Q9UHP3 1055 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 ING1Q9UK53 422 aaPredicted RBP5.48□□□□□ -1.53
PALB2-203ENST00000565038 G3BP2Q9UN86 482 aaKnown RBP5.48□□□□□ -1.53
PALB2-203ENST00000565038 FZD1Q9UP38 647 aa5.48□□□□□ -1.53
PALB2-203ENST00000565038 A0A1B0GTW7 788 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 GAGE12BA1L429 117 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 GAGE12HA6NDE8 117 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 PPM1GO15355 546 aaPredicted RBP5.47□□□□□ -1.53
PALB2-203ENST00000565038 AP1G1O43747 822 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 AGFG2O95081 481 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 FTLP02792 175 aaPredicted RBP5.47□□□□□ -1.53
PALB2-203ENST00000565038 ELANEP08246 267 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 FGFR4P22455 802 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 GCSHP23434 173 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 SMARCA1P28370 1054 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 ACVRL1P37023 503 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 HSD11B2P80365 405 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 KLF10Q13118 480 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 RESTQ13127 1097 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 LRRC41Q15345 812 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 PGS1Q32NB8 556 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 BEAN1Q3B7T3 259 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 UTP14CQ5TAP6 766 aaKnown RBP5.47□□□□□ -1.53
PALB2-203ENST00000565038 SLC4A10Q6U841 1118 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 LRRC55Q6ZSA7 311 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 MAPKAPK5Q8IW41 473 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 IL17RDQ8NFM7 739 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 NLGN4YQ8NFZ3 816 aaPredicted RBP5.47□□□□□ -1.53
PALB2-203ENST00000565038 PROKR1Q8TCW9 393 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 JDP2Q8WYK2 163 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 HPS3Q969F9 1004 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 RGMAQ96B86 450 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 MVB12AQ96EY5 273 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 NUP88Q99567 741 aaPredicted RBP5.47□□□□□ -1.53
PALB2-203ENST00000565038 PACSIN1Q9BY11 444 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 MAN1C1Q9NR34 630 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 ANKFY1Q9P2R3 1169 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 NOB1Q9ULX3 412 aaKnown RBP5.47□□□□□ -1.53
PALB2-203ENST00000565038 SLC45A2Q9UMX9 530 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 FPGT-TNNI3KV9GXZ4 949 aa5.47□□□□□ -1.53
PALB2-203ENST00000565038 CENPVL1A0A0U1RR11 272 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 UNC119BA6NIH7 251 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 F2RL2O00254 374 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 AKAP8O43823 692 aaKnown RBP5.46□□□□□ -1.54
PALB2-203ENST00000565038 OFD1O75665 1012 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 HAUS5O94927 633 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 ADH4P08319 380 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 MAP2K6P52564 334 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 OCA2Q04671 838 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 NOGQ13253 232 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 KCNV1Q6PIU1 500 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 USP51Q70EK9 711 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 RHOUQ7L0Q8 258 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 HEATR3Q7Z4Q2 680 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 SH2D3CQ8N5H7 860 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 CPEB3Q8NE35 698 aaKnown RBP5.46□□□□□ -1.54
PALB2-203ENST00000565038 LARP4BQ92615 738 aaKnown RBP5.46□□□□□ -1.54
PALB2-203ENST00000565038 LENG9Q96B70 501 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 MYEOVQ96EZ4 313 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 MAP3K14Q99558 947 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 TLR10Q9BXR5 811 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 SLC12A5Q9H2X9 1139 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 RNPEPQ9H4A4 650 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 ABCF2Q9UG63 623 aa5.46□□□□□ -1.54
PALB2-203ENST00000565038 PNMA8BQ9ULN7 279 aaPredicted RBP5.46□□□□□ -1.54
PALB2-203ENST00000565038 EID1Q9Y6B2 187 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms