RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 PRELID2Q8N945 189 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 RDH13Q8NBN7 331 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 BANK1Q8NDB2 785 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 EXD1Q8NHP7 514 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 FBXO25Q8TCJ0 367 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 NSUN6Q8TEA1 469 aaKnown RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 APBB2Q92870 758 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 ARHGEF2Q92974 986 aaKnown RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 CD101Q93033 1021 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 ALKBH8Q96BT7 664 aaKnown RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 TRIM51Q9BSJ1 452 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 FRMD8Q9BZ67 464 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 GPR88Q9GZN0 384 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 TMEM117Q9H0C3 514 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 CCDC113Q9H0I3 377 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 PLEKHA4Q9H4M7 779 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 QTRT2Q9H974 415 aaKnown RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 TXLNGQ9NUQ3 528 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 PARVAQ9NVD7 372 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 FETUBQ9UGM5 382 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 ANAPC7Q9UJX3 599 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 NOCTQ9UK39 431 aaKnown RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 RPL26L1Q9UNX3 145 aaKnown RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 EFR3BQ9Y2G0 817 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 ARL2BPQ9Y2Y0 163 aa8.13□□□□□ -1.11
ATXN3-249ENST00000564606 USP15Q9Y4E8 981 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-249ENST00000564606 A0A1W2PRG0 241 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 DENND3A2RUS2 1198 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 TMEM110-MUSTN1A8MSY1 372 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 TCP10L2B9ZVM9 353 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 HNRNPDLO14979 420 aaKnown RBP8.12□□□□□ -1.11
ATXN3-249ENST00000564606 SNPHO15079 494 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 MED7O43513 233 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 CAND2O75155 1236 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 RASSF9O75901 435 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 DCTN3O75935 186 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 PROSCO94903 275 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 RPS12P25398 132 aaKnown RBP8.12□□□□□ -1.11
ATXN3-249ENST00000564606 RFC5P40937 340 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 ECE1P42892 770 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 EFNA5P52803 228 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 SEC24CP53992 1094 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 SNX16P57768 344 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 KRT17Q04695 432 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 CYP24A1Q07973 514 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 KCNA1Q09470 495 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 CCDC15Q0P6D6 951 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 ACVR2BQ13705 512 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 PIGHQ14442 188 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-249ENST00000564606 PSMD6Q15008 389 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 HADHQ16836 314 aaKnown RBP8.12□□□□□ -1.11
ATXN3-249ENST00000564606 XKR3Q5GH77 459 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 LCE2DQ5TA82 110 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-249ENST00000564606 FYB2Q5VWT5 728 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 PTF1AQ7RTS3 328 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 GSTA5Q7RTV2 222 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 PIGWQ7Z7B1 504 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 AMIGO3Q86WK7 504 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 TDRPQ86YL5 185 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 APLFQ8IW19 511 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-249ENST00000564606 ZFPM1Q8IX07 1006 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 NIM1KQ8IY84 436 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 MCOLN2Q8IZK6 566 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 SPICE1Q8N0Z3 855 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 PROCA1Q8NCQ7 364 aaPredicted RBP8.12□□□□□ -1.11
ATXN3-249ENST00000564606 CYP2W1Q8TAV3 490 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 ATP8B4Q8TF62 1192 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 CCT6BQ92526 530 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 C18orf8Q96DM3 657 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 ARHGEF26Q96DR7 871 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 CEP170P1Q96L14 293 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 MAGEB18Q96M61 343 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 KCNK17Q96T54 332 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 HINFPQ9BQA5 517 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 BEGAINQ9BUH8 593 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 CELF4Q9BZC1 486 aaKnown RBP8.12□□□□□ -1.11
ATXN3-249ENST00000564606 PCIF1Q9H4Z3 704 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 AZI2Q9H6S1 392 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 SLC40A1Q9NP59 571 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 TMOD4Q9NZQ9 345 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 WDR35Q9P2L0 1181 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 LGALS13Q9UHV8 139 aa8.12□□□□□ -1.11
ATXN3-249ENST00000564606 DRG1Q9Y295 367 aaKnown RBP8.12□□□□□ -1.11
ATXN3-249ENST00000564606 MYPNQ86TC9 1320 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 C19orf81C9J6K1 198 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 E7ENQ6 273 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 SLC16A4O15374 487 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 CYP26A1O43174 497 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 KIF1CO43896 1103 aaKnown RBP8.11□□□□□ -1.11
ATXN3-249ENST00000564606 SPAG6O75602 509 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 LUC7L3O95232 432 aaKnown RBP8.11□□□□□ -1.11
ATXN3-249ENST00000564606 LMNAP02545 664 aaKnown RBP8.11□□□□□ -1.11
ATXN3-249ENST00000564606 TNNI1P19237 187 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 PTPN7P35236 360 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 PIK3CAP42336 1068 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 RPL21P46778 160 aaKnown RBP8.11□□□□□ -1.11
ATXN3-249ENST00000564606 SCTRP47872 440 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 CACNB3P54284 484 aa8.11□□□□□ -1.11
ATXN3-249ENST00000564606 IRX3P78415 501 aaPredicted RBP8.11□□□□□ -1.11
ATXN3-249ENST00000564606 FMO1Q01740 532 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms