RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 CTXN1P60606 82 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 CDC42EP1Q00587 391 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 GUCY1B3Q02153 619 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 CREMQ03060 361 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 UAP1L1Q3KQV9 507 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 EFCAB2Q5VUJ9 269 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 B3GNTL1Q67FW5 361 aaPredicted RBP6.42□□□□□ -1.38
UBR1-205ENST00000564540 BEND2Q8NDZ0 799 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 ZCRB1Q8TBF4 217 aaKnown RBP6.42□□□□□ -1.38
UBR1-205ENST00000564540 IFI44Q8TCB0 444 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 SLC13A1Q9BZW2 595 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 C11orf54Q9H0W9 315 aaPredicted RBP6.42□□□□□ -1.38
UBR1-205ENST00000564540 PCDHB1Q9Y5F3 818 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 COL4A3Q01955 1670 aa6.42□□□□□ -1.38
UBR1-205ENST00000564540 ANKRD62A6NC57 917 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 B3GALT2O43825 422 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 SBK3P0C264 359 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 FGFR4P22455 802 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 SLC6A4P31645 630 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 ZNF280AP59817 542 aaPredicted RBP6.41□□□□□ -1.38
UBR1-205ENST00000564540 NOMO3P69849 1222 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 HSD11B2P80365 405 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 BRDTQ58F21 947 aaPredicted RBP6.41□□□□□ -1.38
UBR1-205ENST00000564540 NOMO2Q5JPE7 1267 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 DACT2Q5SW24 774 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 CMTR2Q8IYT2 770 aaKnown RBP6.41□□□□□ -1.38
UBR1-205ENST00000564540 TMEM132CQ8N3T6 1108 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 MARS2Q96GW9 593 aaKnown RBP6.41□□□□□ -1.38
UBR1-205ENST00000564540 REXO4Q9GZR2 422 aaKnown RBP6.41□□□□□ -1.38
UBR1-205ENST00000564540 RNPEPQ9H4A4 650 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 HOMER2Q9NSB8 354 aa6.41□□□□□ -1.38
UBR1-205ENST00000564540 CDKL5O76039 1030 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 ZRANB2O95218 330 aaKnown RBP eCLIP6.4□□□□□ -1.38
UBR1-205ENST00000564540 GCP02774 474 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 CKBP12277 381 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 ALAS1P13196 640 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 PROZP22891 400 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 CCND1P24385 295 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 COL10A1Q03692 680 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 Q6YL49 198 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 GPR150Q8NGU9 434 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 TBC1D15Q8TC07 691 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 ASB10Q8WXI3 467 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 CYP4F11Q9HBI6 524 aa6.4□□□□□ -1.38
UBR1-205ENST00000564540 GRM6O15303 877 aa6.39□□□□□ -1.39
UBR1-205ENST00000564540 SLFN5Q08AF3 891 aa6.39□□□□□ -1.39
UBR1-205ENST00000564540 FAM177A1Q8N128 213 aaPredicted RBP6.39□□□□□ -1.39
UBR1-205ENST00000564540 LCORLQ8N3X6 602 aa6.39□□□□□ -1.39
UBR1-205ENST00000564540 FITM2Q8N6M3 262 aa6.39□□□□□ -1.39
UBR1-205ENST00000564540 RNF31Q96EP0 1072 aa6.39□□□□□ -1.39
UBR1-205ENST00000564540 CLPTM1LQ96KA5 538 aa6.39□□□□□ -1.39
UBR1-205ENST00000564540 MRGPRX4Q96LA9 322 aa6.39□□□□□ -1.39
UBR1-205ENST00000564540 DMRTA2Q96SC8 542 aa6.39□□□□□ -1.39
UBR1-205ENST00000564540 ALOXE3Q9BYJ1 711 aa6.39□□□□□ -1.39
UBR1-205ENST00000564540 RNF181Q9P0P0 153 aa6.39□□□□□ -1.39
UBR1-205ENST00000564540 HSFX1Q9UBD0 423 aa6.39□□□□□ -1.39
UBR1-205ENST00000564540 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.39□□□□□ -1.39
UBR1-205ENST00000564540 SGTAO43765 313 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 GPANK1O95872 356 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 ADKP55263 362 aaKnown RBP6.38□□□□□ -1.39
UBR1-205ENST00000564540 CXADRP78310 365 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 SCAPQ12770 1279 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 ATP2B3Q16720 1220 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 SPDYE7PQ495Y7 208 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 HECTD2Q5U5R9 776 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 NACC2Q96BF6 587 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 C11orf21Q9P2W6 132 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 PACSIN3Q9UKS6 424 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 NOP58Q9Y2X3 529 aaKnown RBP6.38□□□□□ -1.39
UBR1-205ENST00000564540 NOX1Q9Y5S8 564 aa6.38□□□□□ -1.39
UBR1-205ENST00000564540 PIPSLA2A3N6 862 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 HAUS5O94927 633 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 CD1AP06126 327 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 ITGAMP11215 1152 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 FCER1AP12319 257 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 MXRA7P84157 204 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 TLE1Q04724 770 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 FLYWCH1Q4VC44 716 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 GADL1Q6ZQY3 521 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 GPR149Q86SP6 731 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 NUP133Q8WUM0 1156 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 VRK1Q99986 396 aaPredicted RBP6.37□□□□□ -1.39
UBR1-205ENST00000564540 BRINP2Q9C0B6 783 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 SYBUQ9NX95 663 aa6.37□□□□□ -1.39
UBR1-205ENST00000564540 LRRC14BA6NHZ5 514 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 AGFG2O95081 481 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 ZFPL1O95159 310 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 FOSP01100 380 aaPredicted RBP6.36□□□□□ -1.39
UBR1-205ENST00000564540 EGR2P11161 476 aaPredicted RBP6.36□□□□□ -1.39
UBR1-205ENST00000564540 IBSPP21815 317 aaPredicted RBP6.36□□□□□ -1.39
UBR1-205ENST00000564540 RECQLP46063 649 aaPredicted RBP6.36□□□□□ -1.39
UBR1-205ENST00000564540 USP14P54578 494 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 DSC2Q02487 901 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 RAB39AQ14964 217 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 PABPC1LQ4VXU2 614 aaKnown RBP6.36□□□□□ -1.39
UBR1-205ENST00000564540 UTP14CQ5TAP6 766 aaKnown RBP6.36□□□□□ -1.39
UBR1-205ENST00000564540 FOXR2Q6PJQ5 311 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 MIER2Q8N344 545 aa6.36□□□□□ -1.39
UBR1-205ENST00000564540 NLGN4YQ8NFZ3 816 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms