RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 PVALEFA0A1B0GWK0 134 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 ANKRD63C9JTQ0 380 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 PODXLO00592 558 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 KIAA0391O15091 583 aaKnown RBP14.57□□□□□ -0.08
CLK3-216ENST00000564468 ADRB2P07550 413 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 SLFN14P0C7P3 912 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 GARTP22102 1010 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 TNFSF9P41273 254 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 CLCN4P51793 760 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 RBM10P98175 930 aaKnown RBP14.57□□□□□ -0.08
CLK3-216ENST00000564468 SLC39A4Q6P5W5 647 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 ADHFE1Q8IWW8 467 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 HDAC7Q8WUI4 952 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 PIK3R5Q8WYR1 880 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 KIF12Q96FN5 646 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 CCDC34Q96HJ3 373 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 FBXL18Q96ME1 805 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 NECTIN4Q96NY8 510 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 ASB7Q9H672 318 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 GOLGA2P5Q9HBQ8 144 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 CPSF3Q9UKF6 684 aaKnown RBP14.57□□□□□ -0.08
CLK3-216ENST00000564468 USP15Q9Y4E8 981 aaPredicted RBP14.57□□□□□ -0.08
CLK3-216ENST00000564468 NUB1Q9Y5A7 615 aa14.57□□□□□ -0.08
CLK3-216ENST00000564468 A0A1B0GVL5 298 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 A0A1W2PQ27 194 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 A0A1W2PQ64 194 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 A0A1W2PQD8 194 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 LACTBL1A8MY62 500 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 EIF3DO15371 548 aaKnown RBP eCLIP14.56□□□□□ -0.08
CLK3-216ENST00000564468 TEX28O15482 410 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 FAM189A1O60320 539 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 GLUD1P00367 558 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 MYL1P05976 194 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 MYBP10242 640 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 PFKFB1P16118 471 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 EPCAMP16422 314 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 PAX3P23760 479 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 SYKP43405 635 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 AFMP43652 599 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 NHLH1Q02575 133 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 SOX4Q06945 474 aaPredicted RBP14.56□□□□□ -0.08
CLK3-216ENST00000564468 ENOX2Q16206 610 aaKnown RBP14.56□□□□□ -0.08
CLK3-216ENST00000564468 FAM26FQ5R3K3 315 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 SYCE2Q6PIF2 218 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 BEST2Q8NFU1 509 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 RIPOR3Q96MK2 946 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 PHF7Q9BWX1 381 aaPredicted RBP14.56□□□□□ -0.08
CLK3-216ENST00000564468 S1PR5Q9H228 398 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 ADAM7Q9H2U9 754 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 SFXN1Q9H9B4 322 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 SERTAD1Q9UHV2 236 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 DERAQ9Y315 318 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 C2orf16Q68DN1 1984 aa14.56□□□□□ -0.08
CLK3-216ENST00000564468 MYO10Q9HD67 2058 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 PRPF6O94906 941 aaKnown RBP14.55□□□□□ -0.08
CLK3-216ENST00000564468 IL18RAPO95256 599 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 FGFR3P22607 806 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 LRPAP1P30533 357 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 MTHFRP42898 656 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 ACOT2P49753 483 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 CASP5P51878 434 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 CBX2Q14781 532 aaPredicted RBP14.55□□□□□ -0.08
CLK3-216ENST00000564468 ZBTB6Q15916 424 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 PSMD5Q16401 504 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 RTP2Q5QGT7 225 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 CYP26C1Q6V0L0 522 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 ANKS3Q6ZW76 656 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 NT5DC4Q86YG4 428 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 SUSD6Q92537 303 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 C18orf25Q96B23 403 aaPredicted RBP14.55□□□□□ -0.08
CLK3-216ENST00000564468 PLEKHA4Q9H4M7 779 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 HPSEQ9Y251 543 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 UBE4BO95155 1302 aa14.55□□□□□ -0.08
CLK3-216ENST00000564468 FAM237AA0A1B0GTK4 181 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 GOLGA6L4A6NEF3 574 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 SYN3O14994 580 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 MEFVO15553 781 aaPredicted RBP14.54□□□□□ -0.08
CLK3-216ENST00000564468 ADSSP30520 456 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 MCM4P33991 863 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 SNRPFP62306 86 aaKnown RBP14.54□□□□□ -0.08
CLK3-216ENST00000564468 ZP2Q05996 745 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 KCNA1Q09470 495 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 TMEM132DQ14C87 1099 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 ATAT1Q5SQI0 421 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 ZBTB41Q5SVQ8 909 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 RARS2Q5T160 578 aaKnown RBP14.54□□□□□ -0.08
CLK3-216ENST00000564468 ARMCX5Q6P1M9 558 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 APPL2Q8NEU8 664 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 LNX1Q8TBB1 728 aaPredicted RBP14.54□□□□□ -0.08
CLK3-216ENST00000564468 ZNF507Q8TCN5 953 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 CCDC47Q96A33 483 aaKnown RBP14.54□□□□□ -0.08
CLK3-216ENST00000564468 B3GALT6Q96L58 329 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 BLZF1Q9H2G9 400 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 C2CD2Q9Y426 696 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 SCN1AP35498 2009 aa14.54□□□□□ -0.08
CLK3-216ENST00000564468 ARHGEF37A1IGU5 675 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 C19orf67A6NJJ6 358 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 TISP43B9A030 160 aa14.53□□□□□ -0.08
CLK3-216ENST00000564468 H7C4K7 107 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms