RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 DOCK3Q8IZD9 2030 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 CYP3A7-CYP3A51PA0A087WV96 503 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 MANSC4A6NHS7 340 aaPredicted RBP11.8□□□□□ -0.52
TCF4-222ENST00000564228 KIAA0391O15091 583 aaKnown RBP11.8□□□□□ -0.52
TCF4-222ENST00000564228 MAP3K13O43283 966 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 PENKP01210 267 aaPredicted RBP11.8□□□□□ -0.52
TCF4-222ENST00000564228 PDHA1P08559 390 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 MYCLP12524 364 aaPredicted RBP11.8□□□□□ -0.52
TCF4-222ENST00000564228 HSPA6P17066 643 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 CYP3A7P24462 503 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 CIITAP33076 1130 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 SH3BGRP55822 239 aaPredicted RBP11.8□□□□□ -0.52
TCF4-222ENST00000564228 FKBP3Q00688 224 aaKnown RBP11.8□□□□□ -0.52
TCF4-222ENST00000564228 TMEM266Q2M3C6 531 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 ZCWPW2Q504Y3 356 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 GPIHBP1Q8IV16 184 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 ZNF784Q8NCA9 323 aaPredicted RBP11.8□□□□□ -0.52
TCF4-222ENST00000564228 HAS1Q92839 578 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 CALML4Q96GE6 196 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 NUDCD1Q96RS6 583 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 PARK7Q99497 189 aaKnown RBP11.8□□□□□ -0.52
TCF4-222ENST00000564228 LRRC27Q9C0I9 530 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 CARD9Q9H257 536 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 R3HDMLQ9H3Y0 253 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 PXMP2Q9NR77 195 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 NAGPAQ9UK23 515 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 TRIM33Q9UPN9 1127 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 DOCK5Q9H7D0 1870 aa11.8□□□□□ -0.52
TCF4-222ENST00000564228 GFPT2O94808 682 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 SLC25A27O95847 323 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 RARGP13631 454 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 RANBP1P43487 201 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 OCRLQ01968 901 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 PGM5Q15124 567 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 ZRSR2Q15696 482 aaKnown RBP11.79□□□□□ -0.52
TCF4-222ENST00000564228 Q4G0T1 1027 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 IRF2BP2Q7Z5L9 587 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 EXOC3L1Q86VI1 746 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 JAMLQ86YT9 394 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 TRIM59Q8IWR1 403 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 FAM133AQ8N9E0 248 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
TCF4-222ENST00000564228 ZNF333Q96JL9 665 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 RMDN2Q96LZ7 410 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 DCLRE1BQ9H816 532 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 ZWILCHQ9H900 591 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 PCMTD2Q9NV79 361 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 DLGAP2Q9P1A6 1054 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 STOML1Q9UBI4 398 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 GGT7Q9UJ14 662 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 AMFRQ9UKV5 643 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 USP20Q9Y2K6 914 aa11.79□□□□□ -0.52
TCF4-222ENST00000564228 NCANO14594 1321 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 PFASO15067 1338 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 IGLV3-22A0A075B6J6 115 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 POTEMA6NI47 508 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 TRAFD1O14545 582 aaPredicted RBP11.78□□□□□ -0.52
TCF4-222ENST00000564228 NVLO15381 856 aaKnown RBP11.78□□□□□ -0.52
TCF4-222ENST00000564228 RIPK2O43353 540 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 AFPP02771 609 aaKnown RBP11.78□□□□□ -0.52
TCF4-222ENST00000564228 H2AFZP0C0S5 128 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 PYGBP11216 843 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 SKIP12755 728 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 VHLP40337 213 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 RFC5P40937 340 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 PTDSS1P48651 473 aaKnown RBP11.78□□□□□ -0.52
TCF4-222ENST00000564228 RASSF2P50749 326 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 CNTN2Q02246 1040 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 MAPK7Q13164 816 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 MTFR1Q15390 333 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 MUM1Q2TAK8 710 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 CEP55Q53EZ4 464 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 ALKBH5Q6P6C2 394 aaKnown RBP11.78□□□□□ -0.52
TCF4-222ENST00000564228 H2AFVQ71UI9 128 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 INTS8Q75QN2 995 aaKnown RBP11.78□□□□□ -0.52
TCF4-222ENST00000564228 FAM13CQ8NE31 585 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 GPRC5AQ8NFJ5 357 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 MIPOL1Q8TD10 442 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 EPS8L3Q8TE67 593 aaKnown RBP11.78□□□□□ -0.52
TCF4-222ENST00000564228 NCSTNQ92542 709 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 AZIN2Q96A70 460 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 LENG9Q96B70 501 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 MAGEB18Q96M61 343 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 MBOAT7Q96N66 472 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 SERPINB12Q96P63 405 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 PDCD2LQ9BRP1 358 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 VCX3BQ9H321 246 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 VCX3AQ9NNX9 186 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 GRHL1Q9NZI5 618 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 PDP2Q9P2J9 529 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 ZMYND8Q9ULU4 1186 aaPredicted RBP11.78□□□□□ -0.52
TCF4-222ENST00000564228 PCDHA12Q9UN75 941 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 PHF24Q9UPV7 400 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 TMEM120BA0PK00 339 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 TESPA1A2RU30 521 aaPredicted RBP11.78□□□□□ -0.52
TCF4-222ENST00000564228 SIGLEC16A6NMB1 481 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 FAM155AB1AL88 458 aaPredicted RBP11.78□□□□□ -0.52
TCF4-222ENST00000564228 PODXLO00592 558 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 MSH4O15457 936 aa11.78□□□□□ -0.52
TCF4-222ENST00000564228 HNRNPCL1O60812 293 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms